DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and CG3942

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster


Alignment Length:691 Identity:187/691 - (27%)
Similarity:287/691 - (41%) Gaps:128/691 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 ESGSGSSAACK--------PTLR-EFNVRLEVPLAAEERLGLTGDVKALGEWQLSRSVALESLDE 212
            |.|..|::..:        ||.. .|.|.....|...|.:.::|:..:||.|.......|...|.
  Fly    19 EDGPSSASETQEPPPPPPVPTTEWPFCVVFHSSLNGNEYVAISGNCPSLGNWDPKEVYILAKNDC 83

  Fly   213 LNWQATVALQSCRQLE------------YRYFVYVED-LSGYKQIRRWETHFKPRSLGPCTELQC 264
            ::     .|.:|||.|            |||.|.:.| .:....||.||:...||.:..|..: .
  Fly    84 IS-----CLCNCRQFEASLEIPRNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNM-L 142

  Fly   265 SQLDVFGITSDNSDLKPQVHRGWLNHEAILQLK-FNG----------------EKMFQVHDIETF 312
            ...||||...|:.:.. ||.|||...|.|:.|| ||.                :.||:|.:....
  Fly   143 KNCDVFGKPHDDDEAN-QVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEVPENPCN 206

  Fly   313 DPQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLEL----------------QPTFGVPYTKGDIVI 361
            :|.: .:|:|..:.....::...:.:.|...|:|                |..||......|:.:
  Fly   207 EPAN-PIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQNALAAQQRFGARCGPKDMEL 270

  Fly   362 FH--ITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGSEGVLHLPIKSAKNAD 416
            ||  |..|.|.:    :||:.|:.:::.        .|...|:...|.|:||...:.|..| :..
  Fly   271 FHCSIAFPEETL----YRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLGTEGSARVKITCA-STH 330

  Fly   417 ETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAERENTIASFL 481
            ..|..:.:.|:.::|......|..::|..||.|:...:::||:|:|.:|...:...||||:..|.
  Fly   331 RPLMEMCVRYLIIRPLPNFRCDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFK 395

  Fly   482 SAHEHHADMIELDVHLTADGVPVIYHDFGLR----TAPPGKQI---------------------- 520
            .|...:|||:|:||.||.|...|:||||.||    ..|..:.:                      
  Fly   396 QAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYENLNKLMLLAM 460

  Fly   521 --SRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPR-----MEHRIFPTLVEVL-- 576
              |:...|..|.::..:|:.||.:::.. .||      |...:..     :|.|.||.|:::|  
  Fly   461 GGSKRKDLIAVPLEAFSYDQLKEVKVLR-FAG------SKGCDKSCDRMLLEQRPFPLLLDLLDE 518

  Fly   577 EKLPKSLGIDVEIKWPQ----RRQGGGSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFDADM 637
            |.||..:|..:||||||    ||...|| .:.|.|:||:.|.::..|:.|...|.|:|.|||||:
  Fly   519 ENLPVDMGFLIEIKWPQMTNMRRWESGS-FKPTFDRNFYVDTILEIVLNKAGKRRIVFCSFDADI 582

  Fly   638 CTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEM 702
            |.|:||||||:||..|.:......| :.|.|......||....:.|..|...||...|  |....
  Fly   583 CAMVRFKQNVYPVTLLLEDPHSPVQ-YADQRVSVQDVAVRFCNSLEFLGLTLHANSLL--NKPST 644

  Fly   703 LRKAKDLGQIAVIWGDDCNSKERVQYFTRIGATATCYDRSD 743
            :.....:...|.::|......|......:.|.....|||.|
  Fly   645 MAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLD 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 38/143 (27%)
GDPD_GDE5 454..741 CDD:176549 99/325 (30%)
GDPD 458..744 CDD:281062 101/325 (31%)
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888 35/126 (28%)
GDPD_GDE5 368..684 CDD:176549 100/326 (31%)
GDPD 372..685 CDD:281062 100/323 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473131
Domainoid 1 1.000 104 1.000 Domainoid score I2222
eggNOG 1 0.900 - - E1_COG0584
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3769
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184242at33208
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - mtm976
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1268
109.800

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