DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and gdpd3a

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_998366.1 Gene:gdpd3a / 406482 ZFINID:ZDB-GENE-040426-2279 Length:315 Species:Danio rerio


Alignment Length:335 Identity:76/335 - (22%)
Similarity:114/335 - (34%) Gaps:127/335 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHD------------ 508
            :.|||.....|       ||||.:|..|.|...:|:|||.|||.||..::.||            
Zfish    42 ISHRGGSGERI-------ENTIEAFTHAVEVGTEMLELDCHLTKDGFVMVSHDENLLRQTGQDVS 99

  Fly   509 ---FGLRTAPPGKQ----------ISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYP--SH 558
               ..|...||.|:          .|.....:..|::|:                 .|::|  :.
Zfish   100 ISSLNLEDLPPYKETLEVTFKTGHFSTGSDRKLALLEDV-----------------FRKFPHTAV 147

  Fly   559 NAEPRMEHRIFPTLVEVLEKLPKSL---GIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVI 620
            |.|.: |:.|  .|:|.:.:|.|..   ||.|   |        :..:.||.:|  ..|:     
Zfish   148 NIEVK-ENNI--VLIEKISELVKQYNREGISV---W--------ASVDSTIMEN--CRKI----- 191

  Fly   621 QKGCGRPIIFSSFDADMCTML-------------RFKQNVFPVMFLTQGETKKWQPFLD-LRTRT 671
              ....|.:||........:|             .|.|..||.:|     .|.:.|..: |::|.
Zfish   192 --NSSMPYMFSQKRGLQLLLLYYTGLLPFVPLGESFLQFYFPPIF-----NKAYIPDTEILKSRL 249

  Fly   672 FIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKA-----KDLG-QIAVIWGDDCNSKERVQYFT 730
            .|                    ||.|..:  :|||     ::.| ||.:.   .||.::.:....
Zfish   250 VI--------------------FLIERLT--MRKALFKHLRERGIQIHLF---VCNEEQDIDAAF 289

  Fly   731 RIGATATCYD 740
            ..|||....|
Zfish   290 AAGATGVMTD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 76/335 (23%)
GDPD 458..744 CDD:281062 76/333 (23%)
gdpd3aNP_998366.1 GDPD_GDE4 13..310 CDD:176553 76/335 (23%)
GDPD 44..301 CDD:281062 76/333 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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