DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and gdpd3a

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_998366.1 Gene:gdpd3a / 406482 ZFINID:ZDB-GENE-040426-2279 Length:315 Species:Danio rerio


Alignment Length:335 Identity:76/335 - (22%)
Similarity:114/335 - (34%) Gaps:127/335 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHD------------ 508
            :.|||.....|       ||||.:|..|.|...:|:|||.|||.||..::.||            
Zfish    42 ISHRGGSGERI-------ENTIEAFTHAVEVGTEMLELDCHLTKDGFVMVSHDENLLRQTGQDVS 99

  Fly   509 ---FGLRTAPPGKQ----------ISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYP--SH 558
               ..|...||.|:          .|.....:..|::|:                 .|::|  :.
Zfish   100 ISSLNLEDLPPYKETLEVTFKTGHFSTGSDRKLALLEDV-----------------FRKFPHTAV 147

  Fly   559 NAEPRMEHRIFPTLVEVLEKLPKSL---GIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVI 620
            |.|.: |:.|  .|:|.:.:|.|..   ||.|   |        :..:.||.:|  ..|:     
Zfish   148 NIEVK-ENNI--VLIEKISELVKQYNREGISV---W--------ASVDSTIMEN--CRKI----- 191

  Fly   621 QKGCGRPIIFSSFDADMCTML-------------RFKQNVFPVMFLTQGETKKWQPFLD-LRTRT 671
              ....|.:||........:|             .|.|..||.:|     .|.:.|..: |::|.
Zfish   192 --NSSMPYMFSQKRGLQLLLLYYTGLLPFVPLGESFLQFYFPPIF-----NKAYIPDTEILKSRL 249

  Fly   672 FIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKA-----KDLG-QIAVIWGDDCNSKERVQYFT 730
            .|                    ||.|..:  :|||     ::.| ||.:.   .||.::.:....
Zfish   250 VI--------------------FLIERLT--MRKALFKHLRERGIQIHLF---VCNEEQDIDAAF 289

  Fly   731 RIGATATCYD 740
            ..|||....|
Zfish   290 AAGATGVMTD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 76/335 (23%)
gdpd3aNP_998366.1 GDPD_GDE4 13..310 CDD:176553 76/335 (23%)
Blue background indicates that the domain is not in the aligned region.

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