DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and gde1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_956537.1 Gene:gde1 / 393213 ZFINID:ZDB-GENE-040426-881 Length:333 Species:Danio rerio


Alignment Length:181 Identity:55/181 - (30%)
Similarity:73/181 - (40%) Gaps:48/181 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQI 520
            |.|||.|.    |||   |||||:..:|.|:.|..:|||:..||||||::.||..:.....|   
Zfish    70 VAHRGGGH----DAP---ENTIAAIRAASENGATGVELDLEFTADGVPILMHDETVDRTTNG--- 124

  Fly   521 SRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLPK-SLG 584
            |.|          :|..|...||.....|       .|....|......|||.|.:|:..| .|.
Zfish   125 SGP----------LNKLLFSELRKLDAAA-------KHRFSDRFRGEKVPTLQEAVEECIKHQLT 172

  Fly   585 IDVEIKWPQRRQGGGSEAEQTIDKNF--------------FADKVIHQVIQ 621
            |..::|      |...||...:.:.|              |..|||:::.|
Zfish   173 IYFDVK------GHPDEAAAALKELFRKYPVLYNTSIVCSFEPKVIYRMRQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 55/181 (30%)
gde1NP_956537.1 GDPD_GDE1 70..325 CDD:176515 55/181 (30%)
Blue background indicates that the domain is not in the aligned region.

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