DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gpcpd1

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_038961393.1 Gene:Gpcpd1 / 362219 RGDID:735140 Length:679 Species:Rattus norvegicus


Alignment Length:665 Identity:194/665 - (29%)
Similarity:311/665 - (46%) Gaps:127/665 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PTLREFNVRLEVPLAAEERLGLTGDVKALGEWQLSRSVALESLD--ELNWQATVALQSCRQLEYR 230
            |:...|.:|  ..|...|...:.|:..|||.|....:|.|...:  |..|:|.:.|.....::||
  Rat     3 PSQVTFEIR--GTLLPGEVFAMCGNCDALGNWSPQNAVPLTESETGESVWKAVIVLSRGMSVKYR 65

  Fly   231 YF--VYVE--DLSGYKQ--IRRWETHFKPRSLGPCTELQCSQLDVFGITSDNSDLKPQVHRGWLN 289
            ||  .::|  .:.|..|  :.:||||.:|||:.|                             |.
  Rat    66 YFRGCFLEPKTIGGPCQVIVHKWETHLQPRSITP-----------------------------LE 101

  Fly   290 HEAILQLKFNGEKMFQVHD-IETFD------PQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLELQ 347
            :|.|:.     :..|.:|: :||.|      ...::|::...||..   |..:|:::.||:..::
  Rat   102 NEIIID-----DGQFGIHNGVETLDSGWLTCQTEIRLRLHFSEKPP---VSITKKKFKKSRFRVK 158

  Fly   348 PTF-GVPYTKGD------IVIFHITLPLE-------RMMEQHFRLEC-----------YSMSN-- 385
            .|. |:.....|      .|:..::..||       ....:|.:.||           ||:..  
  Rat   159 LTLEGLEEDDDDDDKASPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTME 223

  Fly   386 ----ELL----------------------GSATLVTSDLTGSE---GVLHLPIKSAKNADETLAR 421
                ||:                      |:|.|::|.:..||   |:|.|||.| :::.:|:.:
  Rat   224 PDNLELIFDFFEEDLSEHVVQGDVLPGHVGTACLLSSTIAESERSAGILTLPIMS-RSSRKTIGK 287

  Fly   422 LRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAE-RENTIASFLSAHE 485
            :|:.::.::|........:::::.||....| |||||||.|.|......|: :||||||..:|..
  Rat   288 VRVDFIIIKPLPGYSCSMQSSFSKYWKPRIP-LDVGHRGAGNSTTTAKLAKVQENTIASLRNAAS 351

  Fly   486 HHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQI-------SRPDQLEYVLIKDINYELLKRLR 543
            |.|..:|.||||:.|.|||:|||.........|:.       :.|.:|..:.:|::.::.|:.|:
  Rat   352 HGAAFVEFDVHLSKDLVPVVYHDLTCCLTMKRKKFVHTQKYEADPVELFEIPVKELTFDQLQLLK 416

  Fly   544 IFSVIAGQVREYPSHNAEPR---MEHRIFPTLVEVLEKLPKSLGIDVEIKW-PQRRQG-GGSEAE 603
            :..|.|.:.::.....||..   .|::.||:|..|||.||:::|.::|||| .|.|.| ......
  Rat   417 LSHVTALKTKDQKQCMAEEENSFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLS 481

  Fly   604 QTIDKNFFADKVIHQVIQKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLR 668
            ...|.|.|.|.::..|::....|.|:|||||||:|||:|.|||.:|::|||||::..:...:|||
  Rat   482 TYFDMNAFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLR 546

  Fly   669 TRTFIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKAKDLGQIAVIWGDDCNSKERVQYFTRIG 733
            :||...|::.||...:.|...|.||.| .|.| .:::|||.|.:...||||.|..|..:.....|
  Rat   547 SRTTPIAMSFAQFENILGINAHTEDLL-RNPS-YVQEAKDKGLVIFCWGDDTNDPENRRKLKEFG 609

  Fly   734 ATATCYDRSDLFMPE 748
            .....|||...:|||
  Rat   610 VNGLIYDRIYDWMPE 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 31/127 (24%)
GDPD_GDE5 454..741 CDD:176549 112/299 (37%)
GDPD 458..744 CDD:281062 110/298 (37%)
Gpcpd1XP_038961393.1 CBM20_Prei4 4..125 CDD:99888 38/156 (24%)
GDPD_GDE5 319..618 CDD:176549 113/300 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184242at33208
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1268
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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