DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and pgc1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_594955.2 Gene:pgc1 / 2543587 PomBaseID:SPAC4D7.02C Length:311 Species:Schizosaccharomyces pombe


Alignment Length:143 Identity:47/143 - (32%)
Similarity:65/143 - (45%) Gaps:35/143 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 SWPNLDVGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTA 514
            |.|.|.:.|||    |.|..|   ||||.:|..|.:..||.:|.||.||.|.|..|.||      
pombe    29 SKPPLVIAHRG----YKAKYP---ENTILAFQQAVKAGADCVETDVRLTKDEVVCILHD------ 80

  Fly   515 PPGKQISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKL 579
               :.::|...:: |.::|::|||..         |..|..    .||   |...||..:.|.:|
pombe    81 ---RNLNRVFGVD-VDVRDLDYELDN---------GHFRTI----QEP---HEPLPTYEQFLHEL 125

  Fly   580 PKSLGID--VEIK 590
            .|..|::  |:||
pombe   126 TKHPGVNLLVDIK 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 45/139 (32%)
pgc1NP_594955.2 GDPD_YPL206cp_fungi 34..265 CDD:176512 44/138 (32%)
Blue background indicates that the domain is not in the aligned region.

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