DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and gpcp-1

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001256998.1 Gene:gpcp-1 / 180600 WormBaseID:WBGene00019612 Length:690 Species:Caenorhabditis elegans


Alignment Length:679 Identity:182/679 - (26%)
Similarity:299/679 - (44%) Gaps:120/679 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ERLGLTGDVKALGEWQLSRSVAL-ESLDELN-WQATVAL-QSCRQLEYRYF--VYVEDLSGYKQ- 243
            |::.:.|.:..||||...:|..| :|.||.| :.|.|:: .|.::..:||.  :|::....... 
 Worm    20 EKIHVVGSLPVLGEWNPRKSFPLTKSTDEENTFHAIVSVPSSIKEFNFRYIRVMYLDPSENNTSE 84

  Fly   244 ----IRRWETHFKPRSLGPCTELQ-----CSQLDVFGITSDNSDLKPQVHRGWL--NHEAILQLK 297
                :.:|||....|:.....|.|     .:..|.||..|.    |.|:..||:  ..|:::..:
 Worm    85 PIMVLSKWETFNNARTCLIGVESQDGVARKNITDQFGSYSG----KTQITDGWILNEKESVVYFR 145

  Fly   298 FNGE--KMFQVHDIETFDPQHVQLKIVPVEKTAGLHVEYSKQE---------------------- 338
            .:||  |.|    .:::..:..:||:.|.:........|::::                      
 Worm   146 IHGEALKFF----AKSYANKEYRLKVEPFDVRYSEMFSYTRKDITDRRGVWRHSSVYASMSIDGD 206

  Fly   339 ------------YGKSQLEL----QPTFGVPYTKG-------DIVIFHI-TLPLERMMEQHFRLE 379
                        :..:.|.:    .|.||..|..|       |.::|.. |:.|:.:.   ||:|
 Worm   207 DVVNLPTPSLPCFSNTDLSVLTREDPIFGDQYFNGSVFRNDQDYLVFRTRTVSLQNLA---FRIE 268

  Fly   380 CYSMSNELLGSATLVTSDLTGSEGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSP--LD---F 439
            .|. ..:....:.::.|.::|:.|....|:....:|  .:..:.:.|:.|:..:|:.  ||   .
 Worm   269 FYH-GEKRCALSYVLPSSMSGTHGATVSPVIGLSSA--PVGHINVNYMIVKRNKYTDQNLDIDSM 330

  Fly   440 KNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPV 504
            |.|:..||.|....|.:||||.|.||..:. .:|||||.|...|....||.:|:||.||.|...|
 Worm   331 KTTFGRYWRKRNRMLQIGHRGMGSSYTKNI-GQRENTIFSLNEAARRGADYVEMDVQLTKDLKTV 394

  Fly   505 IYHDFGLRTAPPGKQ--ISRP------DQLEYVLIKDINYELLKRLRI--FSVIAGQVREYP--- 556
            :||||.:..|..|:.  .|.|      ..|..:.|||:....|..|..  .|...|...|.|   
 Worm   395 VYHDFHVLVAVAGRDSPSSTPTAAGENKSLHEIAIKDLTLAQLNLLHFEHISRANGSSAESPVAL 459

  Fly   557 ---SHNAEPRMEHRIFPTLVEVLEKLPKSLGIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQ 618
               ....|....|..||:|.:||..:.:::|:::|||:|...|.|..|.:...::|.|.|.::.:
 Worm   460 SVTPSKTETDELHVPFPSLAQVLRHVDENVGLNIEIKYPMYMQDGSHECQGYFEQNKFVDIILAE 524

  Fly   619 VIQKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFE 683
            |.:....|.||||.|:.|:|||:..||:.:||.||..|.|.::.||.|:|:.....|.|.|...|
 Worm   525 VAEHAGNRRIIFSCFEPDICTMITKKQHKYPVSFLVVGATNRYMPFQDIRSDCSKIAANFAAGCE 589

  Fly   684 LAGTAPHAEDFLGENASEMLRKAKDLGQIAVIWGDDCNSKERVQYF-TRIGATATCYDR------ 741
            |.|...|:|:.|.:  .:.:..|:..|.|..:||||.||||..::| ..:......:||      
 Worm   590 LLGVNFHSEELLID--QKPIEIAEKYGLIKFVWGDDLNSKEVQKHFRDEMNVDGLIFDRIGEDEV 652

  Fly   742 --SDLFMPEG-KREAFF-------KSPAL 760
              .::|:.|. .|.:.|       :||::
 Worm   653 LKQNVFVVENHNRSSLFARSQHNSRSPSM 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 31/117 (26%)
GDPD_GDE5 454..741 CDD:176549 104/303 (34%)
GDPD 458..744 CDD:281062 104/310 (34%)
gpcp-1NP_001256998.1 CBM20_Prei4 5..134 CDD:99888 31/117 (26%)
GDPD_GDE5 345..647 CDD:176549 105/304 (35%)
GDPD 349..649 CDD:281062 104/302 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184242at33208
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - mtm4730
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1268
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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