DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18135 and gpcp-2

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001022321.1 Gene:gpcp-2 / 174296 WormBaseID:WBGene00011511 Length:796 Species:Caenorhabditis elegans


Alignment Length:768 Identity:202/768 - (26%)
Similarity:345/768 - (44%) Gaps:143/768 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RELGSRDSRQS-TPRLEKLYQAETESARGHRLISLAQQESCRAFNSGLRRSID---FQSARDLHS 119
            |.:|:.:|..| .||:.:..:.|.|...|..|....:|.        ::.:|.   .:...|.:.
 Worm    18 RHVGTINSSLSRRPRISECVEEEEEDGGGFDLFEEMRQP--------IQENIPMIILEEEEDDND 74

  Fly   120 NPMAMSRTVLILAVALSLQCAAFVDGASITYGTGNELESGSGSSAACKPTLREFNVRLEVPLAAE 184
            |        |:::||                                :|....|.|.:| .|.|.
 Worm    75 N--------LVMSVA--------------------------------RPVRVHFAVDVE-NLHAH 98

  Fly   185 ERLGLTGDVKALGEWQLSRSVAL-ESLDE-LNWQATVALQSCRQLEYRYFVYVEDLSGYKQ---I 244
            :.:.:.|....||.|:.:|::.| :..|. :.|:.:: :....||::|||:....:|...:   :
 Worm    99 QSVYVVGSNDVLGTWEATRAMPLVQDPDRFMRWKGSI-VTDVHQLKFRYFIGYNLMSDQGERLIV 162

  Fly   245 RRWETHFKPRS---LGPCTELQC--SQLDVFGITSDNSDLKPQVHRGWLNH----EAILQLKFNG 300
            .:||....|||   |......:|  .::|:||..:.    :..|..|||.:    :.:|:|..|.
 Worm   163 DKWEAFLHPRSTLCLAESRNDECRVDRVDLFGYYAG----RKCVSDGWLQYPDENQILLRLHGNA 223

  Fly   301 EKMFQVHDIETFDPQHVQLKIVPVE-----KTAGLHVEYSKQEYGKSQLELQPTFGVPYTKGDIV 360
            .|.::.    ..:.::.::|:.|::     ..:| |:.:|   ||:.:.:.:....||..|....
 Worm   224 LKFYKT----AKERKNCRVKMTPLDVRFKAPPSG-HISFS---YGEDEEDEEEDQNVPSNKCTHS 280

  Fly   361 IFHITL---PLERMMEQH--------------------------FRLECYSMSNELLGSATLVTS 396
            ..|:.:   |..:..:|.                          |.:|.:|...:.:|:...:.|
 Worm   281 ATHVAVLSDPRPKFYDQEDTGVTFNNNKDYLVFRTHCLAAEFLAFYIEIFSEERKRIGACYALPS 345

  Fly   397 DLTGSEGVLHLPIKSAKNADETLARLRLPYVAVQPYRY--SPLDFKNTYAHYWPKSWPNLDVGHR 459
            .|..:.|::|||.  ..::...:.::.:.|:.|:....  .|.....||..:|.|. ..|:||||
 Worm   346 SLQDASGIIHLPF--INSSGRPIGQVSIEYLCVRALTRLDGPQFMDQTYCRHWKKR-NALEVGHR 407

  Fly   460 GNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDF----------GLRTA 514
            |.|.||...|.| |||||.|..:|.::.||.:|.||.||.|.:.||||||          ||...
 Worm   408 GAGNSYTKFAMA-RENTIHSLNTAAKNGADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMP 471

  Fly   515 PP--GKQISRPDQLEY--VLIKDINYELLKRLRIFSVIAGQVREYPS---HNAEPRMEHRIFPTL 572
            ||  .:|:. ...|:|  :.:||:....||.|.:..:...|.:|...   ...|...:.:.||||
 Worm   472 PPMTREQLD-SSNLDYHELPVKDLKLSQLKLLMLDHLSFPQKKENVKKLVEAGEEEEDFKPFPTL 535

  Fly   573 VEVLEKLPKSLGIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFDADM 637
            :|.|.|:...:|.:||:|:|..:..|..|.:...::|.|.|.::..|::....|.|:|||||.|:
 Worm   536 LEALTKVDPDVGFNVEVKYPMMQNNGEHECDHYFERNLFVDVILADVMKHAGNRRIMFSSFDPDI 600

  Fly   638 CTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEM 702
            |:|:..|||.:||:||..|||:::.||.|.||.|.:.|||.|...:|.|...::||.|.:...  
 Worm   601 CSMVATKQNKYPVLFLCVGETQRYTPFQDQRTSTSMTAVNFAAGADLLGVNFNSEDLLKDPMP-- 663

  Fly   703 LRKAKDLGQIAVIWGDDCNSKERVQYFTR-IGATATCYDRSDLFMPEGKREAF 754
            ::||.:.|.:..:||:|.:.||.:.||.: :|.....|||  :...|.:|..|
 Worm   664 VKKANEFGMVTFVWGEDLDKKENINYFKKELGVDGVIYDR--IGEEERRRNVF 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 32/131 (24%)
GDPD_GDE5 454..741 CDD:176549 112/304 (37%)
gpcp-2NP_001022321.1 CBM20_Prei4 84..207 CDD:99888 31/128 (24%)
GDPD_GDE5 402..704 CDD:176549 114/307 (37%)

Return to query results.
Submit another query.