DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SIGLEC16 and Siglecg

DIOPT Version :9

Sequence 1:NP_001335293.2 Gene:SIGLEC16 / 400709 HGNCID:24851 Length:481 Species:Homo sapiens
Sequence 2:XP_006540923.1 Gene:Siglecg / 243958 MGIID:2443630 Length:757 Species:Mus musculus


Alignment Length:511 Identity:268/511 - (52%)
Similarity:314/511 - (61%) Gaps:89/511 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLLLPLLLPVLGAGSLNKDPSYSLQVQRQVPVPEGLCVIVSCNLSYPRDGWDESTAAYGYWFKGW 65
            |.||..||..|..|...:..||.|||||.|...||||:.|.|:.|.|...|...:..|||||||.
Mouse     1 MSLLLFLLSFLLDGPQGQMESYFLQVQRIVKAQEGLCIFVPCSFSSPEGKWLNRSPLYGYWFKGI 65

Human    66 TSPKTGAPVATNNQSREVEMSTRDRFQLTGDPGKGSCSLVIRDAQREDEAWYFFRVERGSRVRHS 130
            ..|....||||||:.:.:|...|.||||.||..|.:|||:|:|.|..|...||||:|||.. |.|
Mouse    66 RKPSLSFPVATNNKDKVLEWEARGRFQLLGDISKKNCSLLIKDVQWGDSTNYFFRMERGFE-RFS 129

Human   131 FVNNLFFLKVTALTQKPDVYIPETLEPGQPVTVICVFNWAFKKCPAPSFSWTGAALSPRRTRPST 195
            |... |.|:|.|||||||::|||.||||:||||:|:|:|.|.:||||||||.|.|:|.:.:||.|
Mouse   130 FKEE-FRLQVEALTQKPDIFIPEVLEPGEPVTVVCLFSWTFNQCPAPSFSWMGDAVSFQESRPHT 193

Human   196 SHFSVLSFTPSPQDHDTDLTCHVDFSRKGVSAQRTVRLRVA----SL------------ELQGNV 244
            |::|||||.|..|.|||:|||.:||||  :|.|||||||||    ||            :|..|.
Mouse   194 SNYSVLSFIPGLQHHDTELTCQLDFSR--MSTQRTVRLRVAYAPRSLAISIFHDNVSVPDLHENP 256

Human   245 IYLEVQKGQFLRLLCAADSQPPATLSWVLQDRVLSSSHPWGPRTLGLELRGVRAGDSGRYTCRAE 309
            .:||||:||.|||||.|||||||||||||:|:|||.|.|.|.|||.|||..|:|||||.|||:||
Mouse   257 SHLEVQQGQSLRLLCTADSQPPATLSWVLEDQVLSWSSPVGSRTLALELPWVKAGDSGHYTCQAE 321

Human   310 NRLGSQQRALDLSV--QY----------------------------------------------- 325
            |||||||..|||||  :|                                               
Mouse   322 NRLGSQQHTLDLSVLCEYDLPKVPGPKKDKGVTSGYKQSDYCAACVGDPMSDAPTHPQLPSLGGM 386

Human   326 --------------------PPENLRVMVSQANRTVLENLRNGTSLRVLEGQSLRLVCVTHSSPP 370
                                ||::|||.||||||||||.|||..||.|||||||.|||||:|:||
Mouse   387 FCPGRRPWPVWSQFPVFIADPPQDLRVTVSQANRTVLEILRNAISLPVLEGQSLCLVCVTYSNPP 451

Human   371 ARLSWTRWGQTVGPSQPSDPGVLELPRVQMEHEGEFTCHARHPLGSQRVSLSFSVH 426
            |.:||....||:.|.|.|:|||||||.||.||||||||.|::|||:||:|||.|||
Mouse   452 ANVSWAWVTQTLIPIQSSEPGVLELPLVQREHEGEFTCAAQNPLGAQRISLSLSVH 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIGLEC16NP_001335293.2 Ig_Siglec_N 22..141 CDD:143189 58/118 (49%)
IG_like 247..323 CDD:214653 58/75 (77%)
IG_like 350..425 CDD:214653 51/74 (69%)
SiglecgXP_006540923.1 Ig 22..132 CDD:386229 56/110 (51%)
Ig 145..216 CDD:386229 45/70 (64%)
Ig 256..335 CDD:386229 58/78 (74%)
IG 431..506 CDD:214652 51/74 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 160 1.000 Domainoid score I32006
eggNOG 00.000 Not matched by this tool.
HGNC 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001383
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12035
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X34
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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