DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIGLEC16 and LOC101884840

DIOPT Version :9

Sequence 1:NP_001335293.2 Gene:SIGLEC16 / 400709 HGNCID:24851 Length:481 Species:Homo sapiens
Sequence 2:XP_021322151.1 Gene:LOC101884840 / 101884840 -ID:- Length:692 Species:Danio rerio


Alignment Length:352 Identity:76/352 - (21%)
Similarity:140/352 - (39%) Gaps:84/352 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    37 CVIVSCNLSYP-------RDGWDESTAAYGYWFKGWTSPKTGAPVATNNQSREVEMSTRDRFQLT 94
            ||::.|:.|..       |..|..:...|.|    .|.|.            :|..:.:.|.:|.
Zfish   342 CVVIPCSFSVEHKYLTGLRVRWVNNNGGYMY----HTDPV------------DVLDNFKGRTRLL 390

Human    95 GDPGKGSCSLVIRDAQREDEAWYFFRVERGSRVRHSFVNNLFFLKVTALTQKPDV-YIPETLEPG 158
            |:|.:.:|:|.:.|.:..|...:.|:.|: ...::||.|:..|:.:.|...:|.: .:||.:|||
Zfish   391 GNPDERNCTLEMDDVRTHDNGPFCFQAEK-KEEKYSFNNSCVFIIMRASPDQPVMSSVPEDIEPG 454

Human   159 QPVTVICVFNWAFKKCPAPSFSWTGAALSPRRTRPSTSH----------FSVLSFTPSPQDHDTD 213
            ..|||.|.........| |..:|     |....|.:.||          .|.:.|.|:..:.:.:
Zfish   455 TAVTVKCSVKHTCSSHP-PKITW-----SVPTVRETISHNPMGGGVWETVSKMKFIPTGYEEEDE 513

Human   214 LTCHVDF----SRKGVSAQRTVRLRVASLE-----LQGNVIYLEVQKGQFLRLLCAADSQPPATL 269
            :.|..:|    ::...||..:|: |:.::|     :..:::::         |:|          
Zfish   514 IICSANFWGGKTQSNSSAPLSVK-RIQAVESGPYIIASSLVFV---------LIC---------- 558

Human   270 SWVLQDRVLSSSH---PWGPRTLGLELRGVRAGDSGRYTCRAENRL-----GSQQRALDLSVQYP 326
              :|....:...|   |....|...:.|.|....|.|:: ..|.|.     |::....|...:.|
Zfish   559 --ILAGVFMYKRHQRQPCEDITRSEQRRSVWNRFSSRFS-MPEGRAAWFNSGNRSDIRDAPGRPP 620

Human   327 -PENLRVMVSQANRTVLENLRNGTSLR 352
             ||..|.:.|:.:|.  ::.||..::|
Zfish   621 KPEQRRSIWSRFSRH--QSPRNNANMR 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIGLEC16NP_001335293.2 Ig_Siglec_N 22..141 CDD:143189 25/110 (23%)
IG_like 247..323 CDD:214653 14/83 (17%)
IG_like 350..425 CDD:214653 1/3 (33%)
LOC101884840XP_021322151.1 Ig 1..>83 CDD:325142
Ig 226..307 CDD:325142
Ig 335..426 CDD:325142 21/100 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12035
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X34
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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