DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6836 and AT3G05940

DIOPT Version :10

Sequence 1:NP_649079.2 Gene:CG6836 / 40070 FlyBaseID:FBgn0036834 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_187245.2 Gene:AT3G05940 / 819764 AraportID:AT3G05940 Length:422 Species:Arabidopsis thaliana


Alignment Length:293 Identity:53/293 - (18%)
Similarity:115/293 - (39%) Gaps:57/293 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LAIFIASLLTILNISIFATTVSRLRRHL---DKPL----LGPSIMMVGLYPIISVAALVTILVPY 106
            |.|::..|..:..:...|..:..:.:||   .:|:    :...:.||.:|.::|..|||   :|.
plant     5 LPIYLIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALV---LPK 66

  Fly   107 SWFICHTVMHV--MFMVGGPVFRTLLFRYVGSEQNYVKETAGEAVQLNTPPCCCC---------- 159
            |....:::..|  .:::..  |.:|...:||...:.|....|.:::.:.....||          
plant    67 SSIYFNSIREVYEAWVIYN--FLSLCLAWVGGPGSVVISLTGRSLKPSWHLMTCCIPPLPLDGRF 129

  Fly   160 ---CL--CLPMVIPTKAKLCISRYMVWQMPFWQGSI-----MLVMNILY---YRDIQLYRQVMFF 211
               |.  ||..||.....:.::..:..:..:..|:.     .|.:.|:|   | .:.||..|:|:
plant   130 IRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIYTISY-TVALYALVLFY 193

  Fly   212 FI------PF-------IVCSIVLGAWSLQITVRMITK---VRGDYQ---LRKKMFCLQLVVMLC 257
            ..      ||       |:.|:|...:...:.|.:..|   :|.:.:   .:..:.|:::::...
plant   194 VACKDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLFAKSGFIRDEEEAALFQNFIICVEMLIAAA 258

  Fly   258 KLQYLVLYDQLDGIKMGGEYPINHTVYKQTIIN 290
            ...|...|.:.....:||....:.::....::|
plant   259 AHFYAFPYKEYAEANVGGARSFSGSLAHALMLN 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6836NP_649079.2 Solute_trans_a 50..309 CDD:460991 52/292 (18%)
AT3G05940NP_187245.2 Solute_trans_a 9..269 CDD:460991 48/265 (18%)

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