DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6836 and osta-2

DIOPT Version :10

Sequence 1:NP_649079.2 Gene:CG6836 / 40070 FlyBaseID:FBgn0036834 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_741003.1 Gene:osta-2 / 173966 WormBaseID:WBGene00015942 Length:342 Species:Caenorhabditis elegans


Alignment Length:288 Identity:64/288 - (22%)
Similarity:118/288 - (40%) Gaps:46/288 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MDPTENISQVL-DQNRNNTNSLRTHPTVEEYYENMTAFLSLAIFIASLLTILNISI--------- 64
            :.|.|.:.::| |...|.|.:....|..:.:..::|.....::.:|:.:|:..:.:         
 Worm     4 ISPWETLVKLLTDSLLNCTGTHEDVPHAKTFLRSLTTTYIASLAVATAVTVGTVCLAVLHLIYIH 68

  Fly    65 FATTVSRLRRHLDKPLLGPSIMMVGLYPIISVAALVTILVPYSWFICHTVMHVMFMVGGPVFRTL 129
            |..|.|..|.|:        :::....|::|:.|||.:.:|..||:.|.:..:.|.....|...|
 Worm    69 FYITHSSRRLHI--------VLLACTAPLVSLLALVAMYMPRVWFLSHLLSFLYFSFALWVIICL 125

  Fly   130 LFRYVGSEQNYVKETAG--EAVQLNTPPCCCCCLCLPMVIPTKAKLCISRYMVWQMPFWQGSIML 192
            |..........|.:...  :.|::.|||.||...|||.|.....|:.....||.|.|..:....|
 Worm   126 LLHIFDGHHALVTKMMQRLQYVEIATPPFCCLFPCLPKVRLEGKKIRWCELMVMQAPIVRLFATL 190

  Fly   193 VMNILY--YRDIQL--YRQVMFFFIPFIVCSIVLGAWSLQITVRMITKVRGDYQLRKKMFCLQLV 253
            |..::|  |:|..|  .:.:.|..:|    |::.|.:...|.|..::::.               
 Worm   191 VSLVIYFEYQDQGLVPLKVLDFITLP----SLLAGIYGTHILVTTVSRMD--------------- 236

  Fly   254 VMLCKLQYLVLYDQLDGIKM--GGEYPI 279
             .|...:|:|::..||...|  |.:.|:
 Worm   237 -ELISYRYVVVFRLLDFFFMVFGLQQPV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6836NP_649079.2 Solute_trans_a 50..309 CDD:460991 56/247 (23%)
osta-2NP_741003.1 Solute_trans_a 46..302 CDD:460991 56/246 (23%)

Return to query results.
Submit another query.