DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRICKLE3 and pk

DIOPT Version :9

Sequence 1:NP_006141.2 Gene:PRICKLE3 / 4007 HGNCID:6645 Length:615 Species:Homo sapiens
Sequence 2:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster


Alignment Length:801 Identity:283/801 - (35%)
Similarity:354/801 - (44%) Gaps:277/801 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    75 DFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPH 139
            |.||.|.||||||||.|||.||||||:|:||..:||.:|:|||||||||||:||::|||||||||
  Fly   516 DMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPH 580

Human   140 DSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQIGGGDIAVFASR 204
            |:|.:||.:|.:||:||||.||.||||:.||||.||   ..::...|:.|...|..|||||||:|
  Fly   581 DNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVR---QLMSARPCDGCDDLISTGDIAVFATR 642

Human   205 AGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSPECTEAEGR 269
            .|..|.|||.||.|:.|:|||||||||:..|::||||||||.|:|||.||||||.:.||||||||
  Fly   643 LGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGR 707

Human   270 HWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHA 334
            .|||:||.|.||:..||||||:||:.:|:|..|::|..|||||.|||.||:|||||:::||||||
  Fly   708 AWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSHDGQHWHA 772

Human   335 SDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPT-------------------------A 374
            :|.||.|:.|..:||||.||||||.|:||.|||.|..||                         |
  Fly   773 TDECFSCNTCRCSLLGRAFLPRRGAIYCSIACSKGEPPTPSDSSGTGMYTTPTPPTQRVRPHPQA 837

Human   375 PGPSR---RSWSAGPVTAP----------------------------------LAASTASFSAVK 402
            |.|:|   ...|:.|..:|                                  .|||.:....||
  Fly   838 PLPARIPSSHASSSPPMSPQQQQQHQATFNQAMYQMQSQQMEAAGGLVDQSKSYAASDSDAGVVK 902

Human   403 --------GASETT------TKGTSTELAPATGP----------------------EEPSRFLRG 431
                    |..:.|      ...||..|:|...|                      .|.|..|..
  Fly   903 DLEHGGHMGGGDLTDFSGGRASSTSQNLSPLNSPGDFQPHFLPKPMELQRDGVYNFNEMSSNLDA 967

Human   432 A------------------PHRHSMPELGLRSVP----------------------------EPP 450
            |                  ||..|||||..:.|.                            .||
  Fly   968 AWSAKPTNSYHLQRQLLENPHTASMPELAGKLVAPPAHMQHLSQLHAVSSHQFQQHEYADILHPP 1032

Human   451 PESPGQ------PNL-------------RPDDSAFGR-----QSTPRVSFRDP----LVSEGGPR 487
            |..||:      |||             .|..||..|     .||...|...|    ::|.....
  Fly  1033 PPPPGEIPELPTPNLSVASTALPPELMGSPTHSAGDRSLNTPMSTQSASHAPPHPVSILSGASSS 1097

Human   488 RTLSAPPAQRR--RPRSPPPRAPSRRRH--------------------------HHHNH------ 518
            ..:|..||:::  |....|...|..|.:                          |.|.|      
  Fly  1098 SPMSGEPAKKKGVRFEGIPDTLPRSRSYSGNGAGTSGGGERERDRDKDKEGGGRHGHGHSSRRRR 1162

Human   519 ---------HHH----HNRH----------------------------------PSRR---RHYQ 533
                     ||.    |..|                                  |||:   |..:
  Fly  1163 RRKSSSSSSHHRSGSGHRSHSTTRADTYAPAQPLSSSYQGPPSVLQAANLVHESPSRQQRERERE 1227

Human   534 CDAGSGSDSESCSSSPSSSSSESSEDDGFFLGERIPLPPHL----CRPMPAQDTAMETFNSPSLS 594
            .:.....:|:.||:  .||||.||||  :.:..::|...|.    ...:|....|.:....|| .
  Fly  1228 REREESEESDVCST--CSSSSSSSED--YMMMYQLPQRRHYGGVRVSYVPNDALAYDRKRKPS-E 1287

Human   595 LPRDSRAGMPRQARDKNCIVA 615
            |..|         :|||||::
  Fly  1288 LGGD---------KDKNCIIS 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRICKLE3NP_006141.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
PET_Prickle 82..178 CDD:193602 68/95 (72%)
LIM1_Prickle 186..244 CDD:188799 35/57 (61%)
LIM2_Prickle 249..304 CDD:188802 36/54 (67%)
LIM3_Prickle 309..367 CDD:188804 39/57 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..567 67/364 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..615 9/27 (33%)
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 68/97 (70%)
LIM1_Prickle 624..682 CDD:188799 35/57 (61%)
LIM2_Prickle 687..742 CDD:188802 36/54 (67%)
LIM3_Prickle 747..805 CDD:188804 39/57 (68%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152353
Domainoid 1 1.000 149 1.000 Domainoid score I4411
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 511 1.000 Inparanoid score I1323
Isobase 1 0.950 - 0 Normalized mean entropy S3648
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 1 1.000 - - FOG0001066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.850

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