DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRICKLE3 and Tes

DIOPT Version :9

Sequence 1:NP_006141.2 Gene:PRICKLE3 / 4007 HGNCID:6645 Length:615 Species:Homo sapiens
Sequence 2:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster


Alignment Length:812 Identity:147/812 - (18%)
Similarity:207/812 - (25%) Gaps:476/812 - (58%)


- Green bases have known domain annotations that are detailed below.


Human     6 SRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMC 70
            |||.:..|: ....:...|.||..|:::|||..||.|||:|::||||:.:   |..|.|      
  Fly    24 SRREQLKRS-KLGHEAGAGAPCAECKDKCPGLDLHFWRKVCRNCKCPKIQ---HVCPDD------ 78

Human    71 RLISDFQRHSISDDDSGCASEE-----------------------YAWVPPGLKPEQVYQFFSCL 112
                        ||.:|.|..|                       ..||||...|:.|..:...|
  Fly    79 ------------DDATGWAQFEILGQIRAKPAYIKIKALASQPVQLEWVPPNAAPDVVTDYMEKL 131

Human   113 PEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIV--- 174
            ...::|...|.....|..||..|:||||.:|..|..|.|.|..:|:.:.|:.:.:.:|:|:|   
  Fly   132 GTAQIPVAGSDAALKRKMQLELQVPPHDLDAALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRL 196

Human   175 ----------------------------------------------------------------- 174
                                                                             
  Fly   197 GDRLNHAQVEHVAPALMPTQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVA 261

Human   175 ----------------------------------------------------------------- 174
                                                                             
  Fly   262 FSEPLCESTAQFEENGALRAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLG 326

Human   175 ----------------------------------------------------------------- 174
                                                                             
  Fly   327 PIAEFRKEYVNNPQFRAEINTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRR 391

Human   175 ----------------------------------------------------------------- 174
                                                                             
  Fly   392 VKFGGVSTIVYDCGLPANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLA 456

Human   175 ----------------------------------RIF---------------------------- 177
                                              |:|                            
  Fly   457 ELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLD 521

Human   178 ---------------------------------------------PVT----------------- 180
                                                         |.|                 
  Fly   522 DDQLLDEIDKVFADMANGCKDISYPKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFAS 586

Human   181 ITG-----------------------------------AICEECGKQIGGGDIAVFASRAGLGAC 210
            |.|                                   .:|.:|.:.|..|::||.|.|||....
  Fly   587 IPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIA 651

Human   211 WHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLR-PRCQACDEIIFSPECTEAEGRHWHMD 274
            |||.||.|.||:|||.||:||:|.|:|:|||..|..|: |||:||||:||:.|.|.||...:|:.
  Fly   652 WHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIK 716

Human   275 HFCCFECEASLGGQRYVM--RQSRPHCCACYEARHAEYCDGCGEHIG-LDQGQMAYEGQHWHASD 336
            ||||::|:..|.||:|:.  :.:.|.|..||:...|..|..|...|| .||| :|:...||||| 
  Fly   717 HFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHAS- 779

Human   337 RCFCCS--RCGRALLGRPFLPRRGLIFCSRAC 366
             ||.|:  :|.:.|:|..|..:..:.|||..|
  Fly   780 -CFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRICKLE3NP_006141.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/19 (26%)
PET_Prickle 82..178 CDD:193602 34/488 (7%)
LIM1_Prickle 186..244 CDD:188799 31/57 (54%)
LIM2_Prickle 249..304 CDD:188802 26/56 (46%)
LIM3_Prickle 309..367 CDD:188804 24/61 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..567
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..615
TesNP_611215.1 PET_testin 110..197 CDD:193604 27/86 (31%)
LIM1_Testin_like 627..684 CDD:188726 31/56 (55%)
LIM2_Testin_like 691..748 CDD:188727 26/56 (46%)
LIM 755..810 CDD:295319 23/57 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11790
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

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