DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3819 and zgc:158445

DIOPT Version :10

Sequence 1:NP_649078.1 Gene:CG3819 / 40069 FlyBaseID:FBgn0036833 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_001073540.2 Gene:zgc:158445 / 798069 ZFINID:ZDB-GENE-061215-78 Length:261 Species:Danio rerio


Alignment Length:227 Identity:54/227 - (23%)
Similarity:87/227 - (38%) Gaps:49/227 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LSAIKCTSWPVFVGKKSGSSCNGGTTLIKVG-------FELSGSRFATQYE-VCFNEDEEVTRYV 181
            :|.:...|:|:.|.|...|....|...::..       .:.|.|:...:|: :|..:|:.     
Zfish     6 VSVLLVFSFPLIVTKLVDSFSKCGQFFLEAQPPVIPDILKDSVSQDNNRYKLICQGKDKA----- 65

  Fly   182 YHRLEPGNNYYATGVDRITFGAGGYFAGKNVDKLYTQAVQKET--IDKELDMDSSRFFD--SAKN 242
                     |:||..|  |......|:..|..|...:..:|:|  ||.||....::..|  .:..
Zfish    66 ---------YFATLYD--TTKKIPVFSAYNYIKTDVKTKRKKTFVIDTELQDAQAKNEDYRQSNK 119

  Fly   243 IFLARGHMGAKADFVFAPEQRATFLFINAAPQWQTFNAGNWARVEDGVRAWVAKENKHVECWTGV 307
            |.::|||:..|:..|......|||...|..||.:.||.|.|::.|:..     |.:...:|    
Zfish   120 IEMSRGHLFPKSYAVDQEAAYATFTLTNVVPQQKKFNNGEWSKKENEF-----KSSMDTDC---- 175

  Fly   308 WGVTTLPNKNGEQRQLYLSHDNNGNGLIPVPK 339
                 |.| ||......::      |.||..|
Zfish   176 -----LSN-NGRPEAFVVT------GAIPSEK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3819NP_649078.1 NUC 164..415 CDD:238043 45/181 (25%)
zgc:158445NP_001073540.2 Endonuclease_NS 64..227 CDD:214889 42/169 (25%)

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