DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3819 and Sid

DIOPT Version :9

Sequence 1:NP_001262027.1 Gene:CG3819 / 40069 FlyBaseID:FBgn0036833 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster


Alignment Length:360 Identity:88/360 - (24%)
Similarity:131/360 - (36%) Gaps:104/360 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 DTGYVDVDKDKTIEFHCTSSLASPLSGKSVTAKCVGG---TTFKIDDKEHD------LSAIKCTS 132
            :.|..|:.:...:|.|.|..|.           |.||   |||..   .:|      ||:..|..
  Fly    41 NNGVYDIQRSDIVEIHQTLYLL-----------CNGGLHRTTFLC---RYDSVFSPALSSAACAP 91

  Fly   133 WPVFVGKKSGSSCNGGTTLIKVGFELSGSRFATQYEVCF--------NEDEEVTRYVYHRLEPGN 189
            ....|.|...:||:..:....|||..:| ||...|..||        :...:..|||.....|..
  Fly    92 PDPVVVKVPDTSCSIPSATFAVGFSFNG-RFMELYRNCFDGYSLAFQHSIYKAYRYVNTVPRPNP 155

  Fly   190 NYYATGVDRITFGAGGYFAGKNVDK-LYTQ--AVQKETIDKELDMDSSRFFDSAKNIFLARGHMG 251
            .:.:   |:::.|....:.|:.... |.|.  |||.:.           .||        ||||.
  Fly   156 TWQS---DQLSGGFDNAYEGRATQACLLTNLGAVQPQC-----------KFD--------RGHMT 198

  Fly   252 AKADFVFAPEQRATFLFINAAPQWQTFNAGNWARVEDGVRAWVAK------ENKHVE-------- 302
            ..:.|:....:::||.::||.||::..|.|.|..||    .||..      :|..:.        
  Fly   199 PASAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVE----TWVNNMVRGLYDNPIINNVQIPRTY 259

  Fly   303 -----CWTGVWGVTTL-PNKNGEQRQLYLSHDNNGNGLIPVPKLYFRVVIEPSTKKGIVL----I 357
                 | .|..||..| .|.|.....:||. |||   .||||:..:::|...|..|.::|    :
  Fly   260 DVLKVC-IGALGVHRLRHNTNNNMIPIYLL-DNN---KIPVPEWMYKIVSHLSGDKWVMLTYNDV 319

  Fly   358 GVNN--------------PHLSLEEIKRDYILCTD 378
            .:.|              |.|:|......:.:|.|
  Fly   320 SLPNQQALNQICHVIPCHPGLNLNTKDVGHTVCCD 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3819NP_001262027.1 NUC 164..415 CDD:238043 62/264 (23%)
SidNP_651627.1 Endonuclease_NS 106..358 CDD:279553 68/281 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450460
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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