DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3819 and CG12917

DIOPT Version :9

Sequence 1:NP_001262027.1 Gene:CG3819 / 40069 FlyBaseID:FBgn0036833 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_610558.2 Gene:CG12917 / 36065 FlyBaseID:FBgn0033490 Length:356 Species:Drosophila melanogaster


Alignment Length:287 Identity:74/287 - (25%)
Similarity:124/287 - (43%) Gaps:34/287 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 IKCTS--WPVFVGKKSGSSCNGGTTLIKVGFELSGSRFATQYEVCFNEDEEVTRYVYHRLEPGNN 190
            ::|.|  .||....:.| .|.|  .|..||:.:.|..... |..||  |....|.||.:   .:.
  Fly    94 MRCLSPMQPVTKHIRDG-DCAG--NLYAVGYTIDGKDLEL-YRTCF--DCGQGRLVYSQ---SDV 149

  Fly   191 YYATGVDR---ITFGAGGYFAGKNVDKLYTQAVQKETI---DKELDMDSSRFFDSAKNIFLARGH 249
            ||.|...:   :.|.|...|:.:.     ..|..|..|   .|.:..|...:..:|..:.:.|||
  Fly   150 YYKTFFPKRPFVEFVADEMFSPQE-----AAAYMKSNIYFAFKCIYGDDQSYLQNANYLVINRGH 209

  Fly   250 MGAKADFVFAPEQRATFLFINAAPQWQTFNAGNWARVEDGVRAWVAKENKHVECWTGVWGVTTLP 314
            |.|.|||:|..:..:||.::|..||:::.|.|||.::|..||:.:.| :.:....:|..|:.|||
  Fly   210 MVASADFLFTDQMGSTFRYLNVVPQFKSINDGNWEKIERWVRSQIPK-SSYFRVKSGGIGILTLP 273

  Fly   315 NKNGEQRQLYLSHDNNGNGLIPVPKLYFRVVIEPSTKKGIVLIGVNNPHLSLEEIKRDYILCTDV 379
            :..|..:..:|:     ...||||:..::.| ..:|..|:.:....|....:|:..     |..:
  Fly   274 DTRGFLQSAFLA-----GSKIPVPEWTYKAV-RDATGNGLYVFLTYNSTFQMEKPP-----CLAI 327

  Fly   380 SDRINWISWKKTDITAGYSYACEVPEF 406
            ...:|.......:...||::.|:...|
  Fly   328 CYPVNCPIHLPNNPNDGYTFCCDPKRF 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3819NP_001262027.1 NUC 164..415 CDD:238043 63/249 (25%)
CG12917NP_610558.2 Endonuclease_NS 129..353 CDD:214889 62/246 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450462
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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