DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3819 and pnu1

DIOPT Version :9

Sequence 1:NP_001262027.1 Gene:CG3819 / 40069 FlyBaseID:FBgn0036833 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_594598.2 Gene:pnu1 / 2542291 PomBaseID:SPAC17C9.08 Length:322 Species:Schizosaccharomyces pombe


Alignment Length:278 Identity:62/278 - (22%)
Similarity:107/278 - (38%) Gaps:52/278 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 FELSGSRFATQYEVCFNEDEEVTRYVYHRLEPGNNYYATGVDRITFGAGGYFAGKNVDKLYT-QA 219
            |:.:|....:.|:  ||    .|::..:.: ||    .....|:..|....|..:..:..|| :.
pombe    45 FDSAGRALESIYD--FN----ATKFFQYGI-PG----PVADQRVNHGYMSVFDRRTRNPFYTAET 98

  Fly   220 VQKETID-KELDMDSSRFF--DSAKNIFLA-----------RGHMGAKADFVFAPE-QRATFLFI 269
            :.:|::: ::.:...|.|.  |:...:|.|           |||....||..|:.| ...||...
pombe    99 ITQESLNQRKGNRRYSEFVPDDNIPEMFQAKLGDYRGSGYDRGHQVPAADCKFSQEAMNETFYLS 163

  Fly   270 NAAPQ-WQTFNAGNWARVEDGVRAWVAKENKHVECWTGVWGVTTLPNKN--GEQRQLYLSHDNNG 331
            |..|| ...||...||..||    |..:........|.:.|...||.||  |:....|....|..
pombe   164 NMCPQVGDGFNRNYWAYFED----WCRRLTSKYGSVTIMTGPLYLPKKNERGQWEVQYRVIGNPP 224

  Fly   332 NGLIPVPKLYFRVVI-----EPSTKKGIVLIGVNNPHLSLEEIKRDYILCTDVSDRINWISWKKT 391
            |  :.||..:|:|:|     ||::...:....:.|..::.....:::.:..:|.:|         
pombe   225 N--VAVPTHFFKVIIAEKSGEPTSSPSVAAFVLPNKPIADNFPLKNFAVPVEVVER--------- 278

  Fly   392 DITAGYSYACEVPEFRKK 409
              .:|......||:..:|
pombe   279 --ASGLEILSNVPKGNRK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3819NP_001262027.1 NUC 164..415 CDD:238043 60/270 (22%)
pnu1NP_594598.2 NUC1 5..309 CDD:224777 62/278 (22%)
NUC 78..289 CDD:214683 50/227 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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