DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18223 and tmprss2

DIOPT Version :10

Sequence 1:NP_649077.1 Gene:CG18223 / 40068 FlyBaseID:FBgn0036832 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:226 Identity:72/226 - (31%)
Similarity:107/226 - (47%) Gaps:36/226 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 FGDNHFCGGVIISRTYILTSAHCAMDKRKIVHR---SRVLVVVAG--TTNRLKSRKGLSLNMEVK 132
            :...|.|||.||:..:|||:|||       ||:   .....|.||  |.:.:.|..|.|:|..|.
Zfish   272 YSGRHLCGGSIITPYWILTAAHC-------VHQFSNPGGWTVYAGYLTQSEMASASGNSVNRIVI 329

  Fly   133 KIFVPDKFTVFNTNNIALMMLAKKLPLDNPLVGVINLPTADPEPGLNYT------VLGWGRIFKG 191
            ..|.|:.    |.|:||||.|...|.:...:     .|...|..|:::|      |.|||.:|.|
Zfish   330 HDFNPNT----NENDIALMRLNTALTISTNI-----RPVCLPNKGMSFTAQQDCYVTGWGALFSG 385

  Fly   192 GPLASDILHIDVELLPRDICEKK-VH--IFKEEMMCAGNLNNTMDENPCAGDTGSPLIFNET--- 250
            |..::.:....::|:...||..: |:  :..:.|:|||.|...:|.  |.||:|.||:.|..   
Zfish   386 GSSSATLQEAKIQLIDSTICNSRPVYNGLITDTMICAGKLAGGVDS--CQGDSGGPLVTNVRSLW 448

  Fly   251 -VFGVVSYRVGCGSKTLPSIYTNVYMHMDWI 280
             :.|..|:..||..:..|.:|.||...:|||
Zfish   449 WLLGDTSWGDGCAVRNKPGVYGNVTYFLDWI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18223NP_649077.1 Tryp_SPc 60..280 CDD:214473 70/224 (31%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597
Tryp_SPc 252..482 CDD:238113 72/226 (32%)
Blue background indicates that the domain is not in the aligned region.

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