DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6839 and zgc:172339

DIOPT Version :10

Sequence 1:NP_649076.1 Gene:CG6839 / 40067 FlyBaseID:FBgn0036831 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001104647.1 Gene:zgc:172339 / 564384 ZFINID:ZDB-GENE-080204-115 Length:288 Species:Danio rerio


Alignment Length:149 Identity:44/149 - (29%)
Similarity:60/149 - (40%) Gaps:31/149 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 TFQTAGFFDG-KNVDKLYTQATQLETIN----------NELG--GDAEKYFDSSSN-VYLARGHL 256
            ||:.:   || |.||..:....||.|.:          |..|  .|.:...:..|| |...||||
Zfish    78 TFKRS---DGSKKVDVPWMFEPQLSTTSDSGEMQAFPPNVHGSFSDTQAVLEDYSNIVEFERGHL 139

  Fly   257 GAKADFDYAPEQRATFLFINAAPQWQTFNAGNWARVEDGLRAWVSKNKLNVNCYTGVY---GVTT 318
            .......:..::.||:...|..||.:.||.|:|.|.|.     :.:.:||..|....|   ||||
Zfish   140 NPDEHQAHPDDKAATYTLTNVVPQVREFNIGHWKRHEH-----IIRRRLNNYCRGTAYIVTGVTT 199

  Fly   319 LP------NKDGVETPLYL 331
            ..      |.:.|..|.||
Zfish   200 SGRMIRRYNINRVAVPTYL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6839NP_649076.1 NUC 170..420 CDD:238043 44/149 (30%)
zgc:172339NP_001104647.1 Endonuclease_NS 58..268 CDD:214889 44/149 (30%)

Return to query results.
Submit another query.