DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6839 and Sid

DIOPT Version :9

Sequence 1:NP_649076.1 Gene:CG6839 / 40067 FlyBaseID:FBgn0036831 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster


Alignment Length:405 Identity:93/405 - (22%)
Similarity:147/405 - (36%) Gaps:125/405 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 VYLKTDSEDFYPFSDVGVMEFESGGSLQLWCPSGFNTHSENLLTASCVSGTTFSVGGSNFEFKDL 135
            ||| :.:...|......::|...  :|.|.|..|.:.             |||            
  Fly    36 VYL-SQNNGVYDIQRSDIVEIHQ--TLYLLCNGGLHR-------------TTF------------ 72

  Fly   136 YCKSWPGFKAVKSGATC--NGGIVIR--------------VGFEITSSRFAEQMQICFNEEEEVT 184
            .|:....|....|.|.|  ...:|::              |||.. :.||.|..:.||:      
  Fly    73 LCRYDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSF-NGRFMELYRNCFD------ 130

  Fly   185 RYT---RHKLEPGSNYYETGVAR--ITFQ----TAGFFDGKNVDKLYT-QATQLETINNELGGDA 239
            .|:   :|.:.....|..| |.|  .|:|    :.||      |..|. :|||...:.|......
  Fly   131 GYSLAFQHSIYKAYRYVNT-VPRPNPTWQSDQLSGGF------DNAYEGRATQACLLTNLGAVQP 188

  Fly   240 EKYFDSSSNVYLARGHLGAKADFDYAPEQRATFLFINAAPQWQTFNAGNWARVEDGLRAWVSK-- 302
            :..||        |||:...:.|.....:::||.::||.||::..|.|.|..||    .||:.  
  Fly   189 QCKFD--------RGHMTPASAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVE----TWVNNMV 241

  Fly   303 ---------NKLNV-------NCYTGVYGVTTL-PNKDGVETPLYLAKDDNNNGLIPVPKLYFRV 350
                     |.:.:       ....|..||..| .|.:....|:||.  |||.  ||||:..:::
  Fly   242 RGLYDNPIINNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLL--DNNK--IPVPEWMYKI 302

  Fly   351 VIDPSSHRGIVFVGVNNPHLTEEQIKRDYVICDDVSDQVTYI-------NWKTTDIKAGWSYACE 408
            |...|..:.::.. .|:..|..:|          ..:|:.::       |..|.|:  |.:..|:
  Fly   303 VSHLSGDKWVMLT-YNDVSLPNQQ----------ALNQICHVIPCHPGLNLNTKDV--GHTVCCD 354

  Fly   409 VADFLKTVKHLPALT 423
            ...|: |: :.|.||
  Fly   355 PYRFI-TI-NAPHLT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6839NP_649076.1 NUC 170..420 CDD:238043 67/285 (24%)
SidNP_651627.1 Endonuclease_NS 106..358 CDD:279553 70/294 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450464
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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