DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6839 and CG14062

DIOPT Version :10

Sequence 1:NP_649076.1 Gene:CG6839 / 40067 FlyBaseID:FBgn0036831 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001034074.1 Gene:CG14062 / 43389 FlyBaseID:FBgn0039592 Length:346 Species:Drosophila melanogaster


Alignment Length:334 Identity:82/334 - (24%)
Similarity:147/334 - (44%) Gaps:57/334 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GGSLQLWCPSGFNTHSENLLTASCVSGTTFSVGGSNFEFKDLYCKSWPGFKAVKSGATCNG---- 154
            |.:||:||      :..:::..:|.:|..                  |.|:. ....||..    
  Fly    53 GETLQMWC------NPRDIVATTCQAGRV------------------PAFQP-PLPMTCRAAPAA 92

  Fly   155 -----------GIVIRVGFEITSSRFAEQMQICFNEEEEVTRYTRHKLEPGSNYYETGVARITFQ 208
                       ..:.|||:.:.:::|.|..:.||:.......:..|::. |..:|.|... :.|.
  Fly    93 ITTPVQDRRCPATMYRVGYNVGNNQFLELYRACFDTRAVRAIFVEHRVY-GKPFYITRPC-VQFS 155

  Fly   209 TAGFFDGKNVDKLYTQATQLETINNELGGDAEKYFDSSSNVYLARGHLGAKADFDYAPEQRATFL 273
            :.|...|.: :..|| ...:......|.|:.:.|..::.:|.:.||||.|.|||.:..:..|||.
  Fly   156 SDGVISGAD-EASYT-VRNIHGTFRRLFGNNQNYIPNNRDVIINRGHLAASADFFFGDQLCATFK 218

  Fly   274 FINAAPQWQTFNAGNWARVEDGLRAWVSKNKLNVNCYTGVYGVTTLPNKDGVETPLYLAKDDNNN 338
            ::||.||:::.|.|||..:|..:|..|:.|.. ||..||..||.:||:.:   .|..:....|.|
  Fly   219 YVNAVPQFKSINDGNWETIERFVRNSVTGNNF-VNVRTGARGVLSLPSGN---RPKNVFLSGNRN 279

  Fly   339 GLIPVPKLYFRVVIDPSSHRGIVFVGVNNPHLTEEQIKRDYVICDDVSDQVTYINWKTTDIKAGW 403
               |||:..:::|.:.::...:.|:.:||.:..:.....::  |..|:..|..:|    ..:||:
  Fly   280 ---PVPQWMYKIVRNANNQPIVAFLTLNNIYARQRPAAPNF--CQPVNCPVALVN----TAQAGF 335

  Fly   404 SYACEVADF 412
            |:.|..|.|
  Fly   336 SFCCNPATF 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6839NP_649076.1 NUC 170..420 CDD:238043 67/243 (28%)
CG14062NP_001034074.1 Endonuclease_NS 102..344 CDD:460120 70/258 (27%)

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