DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6839 and pnu1

DIOPT Version :9

Sequence 1:NP_649076.1 Gene:CG6839 / 40067 FlyBaseID:FBgn0036831 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_594598.2 Gene:pnu1 / 2542291 PomBaseID:SPAC17C9.08 Length:322 Species:Schizosaccharomyces pombe


Alignment Length:368 Identity:75/368 - (20%)
Similarity:123/368 - (33%) Gaps:120/368 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SENLLTASCVSGTTFSVGGSNFEFKDLYCKSWPGFKAVKSGATCNGGIVIRVGFEITSSRFAEQM 173
            |..|:....:||.||:         ..|.|.:.|                               
pombe     8 SFGLIAIGAISGVTFT---------HFYYKGYQG------------------------------- 32

  Fly   174 QICFNEEEEVT-RYTR-----HKLEP-----GSNYYETGV------ARITFQTAGFFDGKNVDKL 221
                ::..::| |||:     ..||.     .:.:::.|:      .|:.......||.:..:..
pombe    33 ----SDVPDLTPRYTKFDSAGRALESIYDFNATKFFQYGIPGPVADQRVNHGYMSVFDRRTRNPF 93

  Fly   222 YTQAT-QLETINNELGGDAEKYFDSSSNV----------YLA----RGHLGAKADFDYAPE-QRA 270
            ||..| ..|::|...|......|....|:          |..    |||....||..::.| ...
pombe    94 YTAETITQESLNQRKGNRRYSEFVPDDNIPEMFQAKLGDYRGSGYDRGHQVPAADCKFSQEAMNE 158

  Fly   271 TFLFINAAPQ-WQTFNAGNWARVEDGLRAWVSKNKLNVNCYTGVYGVTTLPNKDGVETPLYLAKD 334
            ||...|..|| ...||...||..||..|...||           ||..|:     :..||||.|.
pombe   159 TFYLSNMCPQVGDGFNRNYWAYFEDWCRRLTSK-----------YGSVTI-----MTGPLYLPKK 207

  Fly   335 D------------NNNGLIPVPKLYFRVVI-----DPSSHRGI-VFVGVNNPHLTEEQIKRDYVI 381
            :            .|...:.||..:|:|:|     :|:|...: .||..|.| :.:....:::.:
pombe   208 NERGQWEVQYRVIGNPPNVAVPTHFFKVIIAEKSGEPTSSPSVAAFVLPNKP-IADNFPLKNFAV 271

  Fly   382 CDDVSDQVTYINWKTTDIKAGWSYAC-------EVADFLKTVK 417
            ..:|.::.:.:...:...|......|       .|.:|:::||
pombe   272 PVEVVERASGLEILSNVPKGNRKQLCSEVVCQLNVKEFVESVK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6839NP_649076.1 NUC 170..420 CDD:238043 66/307 (21%)
pnu1NP_594598.2 NUC1 5..309 CDD:224777 72/361 (20%)
NUC 78..289 CDD:214683 52/227 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13966
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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