Protein Alignment COX6AL2 and Cox6a1

DIOPT Version :10

• Sequence 1: NP_649075.1
• Gene: COX6AL2 / 40066
• FlyBaseID: FBgn0036830
• Length: 289
• Species: Drosophila melanogaster
• Sequence 2: NP_036946.1
• Gene: Cox6a1 / 25282
• RGDID: 2384
• Length: 111
• Species: Rattus norvegicus
• Alignment Length: 113
• Identity: 41/113 - (36%)
• Similarity: 59/113 - (52%)
• Gaps: 17/113 - (15%)

  Fly   121 LLGKSTRKQKKPLTAIQGGDLGCPGRTGKKPQIVAQHSKLWQKISLFGVLPMIAILTLLVF--ST 183
            |||::..:..:|:::      |..|..|.        :::|:.::.|..||.:.:..|.||  |.
  Rat    14 LLGRALPRVGRPMSS------GAHGEEGS--------ARIWKALTYFVALPGVGVSMLNVFLKSR 64

  Fly   184 RSEEERLEFKNYEHMYRRTKRYWFKDGNRTAFHNSHFNALPPAGYEDE 231
            ..|.||.||..|.|:..|||.:.:.|||.|.|||.|.|.| |.|||||
  Rat    65 HEEHERPEFVAYPHLRIRTKPFPWGDGNHTLFHNPHMNPL-PTGYEDE 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
COX6AL2	NP_649075.1	Cyt_c_Oxidase_VIa	146..229	CDD:238465	31/84 (37%)
Cox6a1	NP_036946.1	Cyt_c_Oxidase_VIa	24..109	CDD:238465	34/99 (34%)