DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75d and GLR3.3

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001322169.1 Gene:GLR3.3 / 840859 AraportID:AT1G42540 Length:933 Species:Arabidopsis thaliana


Alignment Length:406 Identity:90/406 - (22%)
Similarity:153/406 - (37%) Gaps:116/406 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 GSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQP--PLSAVANIFAMPF 385
            |:|||::|       |:|.:.     :|..:||| .:.| ..:|::...|  .|::.|..|..||
plant   535 GNFDGVVG-------DVAIVT-----NRTKIVDF-TQPY-AASGLVVVAPFKKLNSGAWAFLRPF 585

  Fly   386 ENDVW-VSILMLLIITTVVLVLELFFSPHNHDMSYMDTLNFVWGAMCQQGFYVEVRNRSA---RI 446
            ...:| |:....|.:..||.:||...:...........:..:|.:.... |:....|..:   |:
plant   586 NRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTM-FFAHRENTVSTLGRL 649

  Fly   447 IVFTTFVAALFLFTSFSANIVALL--QSPSDAIQSLSDLGQSPLEIGVQDTQY------NKIYFT 503
            ::.......|.:.:|::|::.::|  |..|..|:.:..|.:....||.|...:      |::..:
plant   650 VLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNELNIS 714

  Fly   504 ES-TDPV-TKNLYHKKI---ASKG-------ENIYMR---------PLLGMEKMRTGL-FAYQ-- 544
            || ..|: |...|.|.:   .|||       |..|:.         .::|.|..::|. ||:.  
plant   715 ESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGFAFPRD 779

  Fly   545 -----------VEL--QAGYQIVSDTFSEPEKCGL--MELEPFQLP---------------MLAI 579
                       :||  ....|.:.|.:.....|.|  .|||..:|.               :||:
plant   780 SPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLAL 844

  Fly   580 PTRKNFPYKELIRRQL-------------------------RWQREVSLVN-REERKWIPQKPKC 618
                 |.|...|.|||                         |.||.:||:: :||.|...:|.|.
plant   845 -----FLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKEESKHESKKRKI 904

  Fly   619 EGGVGGFVSIGITECR 634
            :|.:..  :.|.|..|
plant   905 DGSMND--TSGSTRSR 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 37/167 (22%)
Lig_chan 388..644 CDD:278489 71/339 (21%)
GLR3.3NP_001322169.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.