DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and GLR3.6

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001326369.1 Gene:GLR3.6 / 824311 AraportID:AT3G51480 Length:903 Species:Arabidopsis thaliana


Alignment Length:520 Identity:110/520 - (21%)
Similarity:183/520 - (35%) Gaps:139/520 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SELRVLHYENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIR---------NSRHVIHALQHFGSAI 252
            |.|.|:..:.:.|.|.|...|:.| .|.       ||:|:         |.||:     ..|...
plant   413 SGLSVMPADEMENTSFSGQKLHSV-VWP-------GHSIKIPRGWVFSNNGRHL-----RIGVPN 464

  Fly   253 TYR-QDLEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHRLMLELANRLNMSYNTYQTVNY 316
            .|| :::..:..|..|.....|:|          |..|:.:.:.:..||             |.:
plant   465 RYRFEEVVSVKSNGMITGFCVDVF----------IAAINLLPYAVPFEL-------------VAF 506

  Fly   317 GWRQPNGSFDGLMGRFQR--YELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQP--PLSAV 377
            |....|.|...|:.....  |:..:..:.|.  .:|..:.|| .:.| |.:|::...|  .|.:.
plant   507 GNGHDNPSNSELVRLITTGVYDAGVGDITII--TERTKMADF-TQPY-VESGLVVVAPVRKLGSS 567

  Fly   378 ANIFAMPFENDVW-VSILMLLIITTVVLVLELFFSPHNHDMSY-----MDTLNFVWGAMCQQGFY 436
            |..|..||...:| ::....||:..|:..||     |.|:..:     ...:...|.:.....|.
plant   568 AMAFLRPFTPQMWLIAAASFLIVGAVIWCLE-----HKHNDEFRGPPRRQVITTFWFSFSTLFFS 627

  Fly   437 VEVRNRS--ARIIVFTTFVAALFLFTSFSANIVALLQSPSDAIQSLSDLGQSPLEIGVQDTQYNK 499
            ......|  .||::.......|.:.:|::|::.::|     .:..||    ||:: |::..|.|.
plant   628 HRETTTSNLGRIVLIIWLFVVLIINSSYTASLTSIL-----TVHQLS----SPIK-GIETLQTNH 682

  Fly   500 IYFTESTDP--------VTKNLYHKKIASKGENIYMR---PLLGMEKMRTGL------------- 540
                   ||        |...|.|:.      ||::.   ||...|:....|             
plant   683 -------DPIGYPQGSFVRDYLIHEL------NIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVV 734

  Fly   541 --FAYQVEL----QAGYQIVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFPYKELIRRQLRWQR 599
              .|| :||    :..:.||...|:   |.|.    .|..|       :|.|....:...:....
plant   735 DERAY-IELFLSNRCEFGIVGQEFT---KNGW----GFAFP-------RNSPLAVDVSAAILQLS 784

  Fly   600 EVSLVNREERKWIPQKPKCEGGVGGFVSIGITECRYALGIF-GCGAAVSFVLFLFE-FIFRHFKQ 662
            |...:.|...||:.:| .| ...|..:.:...|.:...|:| .||.|....|.::. .:.|.|.|
plant   785 ENGDMQRIRDKWLLRK-AC-SLQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQFGQ 847

  Fly   663  662
            plant   848  847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 40/195 (21%)
Lig_chan 388..644 CDD:278489 59/294 (20%)
GLR3.6NP_001326369.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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