DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and GLR3.5

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001324013.1 Gene:GLR3.5 / 817800 AraportID:AT2G32390 Length:953 Species:Arabidopsis thaliana


Alignment Length:631 Identity:127/631 - (20%)
Similarity:208/631 - (32%) Gaps:225/631 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 DALDE------HKDAPPPKSFHANNSTHWETSFLLPALP-YKMGILLLEFSSECALNLLRWSAA- 161
            |||.:      :|.|.||   .|:||:   .|.||.::. .:..|.::..:.:..||:  :|.| 
plant   202 DALAKKRAKISYKAAFPP---GADNSS---ISDLLASVNLMESRIFVVHVNPDSGLNI--FSVAK 258

  Fly   162 ------SEHNYFTTNRFWLLLT------EDPGDIDLLEDPEIF--IPPDSELRVLHYENVGNFSC 212
                  |.:.:.||:  |||..      .||..:|||:....|  ..|:|       :|...|. 
plant   259 SLGMMGSGYVWITTD--WLLTALDSMEPLDPRALDLLQGVVAFRHYTPES-------DNKRQFK- 313

  Fly   213 SLIDLYKVAAWKPL--KRTLVGHNIRNSRH---------VIHALQHF---GSAITYRQD------ 257
                    ..||.|  |.:|...:..||..         |..||..|   |:.:|:..|      
plant   314 --------GRWKNLRFKESLKSDDGFNSYALYAYDSVWLVARALDVFFSQGNTVTFSNDPSLRNT 370

  Fly   258 ------------------------------LEG-IVFNS-------------------------- 265
                                          |.| |.|||                          
plant   371 NDSGIKLSKLHIFNEGERFLQVILEMNYTGLTGQIEFNSEKNRINPAYDILNIKSTGPLRVGYWS 435

  Fly   266 ---AIVIAFPDLF------TNIEDLSLRHIDTISKV------------NHRLMLELANRLNMSYN 309
               ...:|.|:..      |:.:|..|..|....:|            ...|.:.:.||  :||.
plant   436 NHTGFSVAPPETLYSKPSNTSAKDQRLNEIIWPGEVIKPPRGWVFPENGKPLKIGVPNR--VSYK 498

  Fly   310 TYQT-------------------------------VNYGWRQPNGSFDGLMGRFQRYELDLAQLA 343
            .|.:                               :.||..:.|.|:|.|:........|:|...
plant   499 NYASKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGD 563

  Fly   344 IFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVAN--IFAMPFENDVW-VSILMLLIITTVVLV 405
            :.:..:|...|||....  :.:|::...|...|.::  .|..||..::| |:..:.|.:..|:.:
plant   564 VTIITNRTKFVDFTQPF--IESGLVVVAPVKGAKSSPWSFLKPFTIEMWAVTGALFLFVGAVIWI 626

  Fly   406 LELFFSPHNHDMSYMDTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLF------TSFSA 464
            ||..|:...........:...|.:.....|    .:|...:.....||..::||      :|::|
plant   627 LEHRFNEEFRGPPRRQIITVFWFSFSTMFF----SHRENTVSTLGRFVLLVWLFVVLIINSSYTA 687

  Fly   465 NIVALL--QSPSDAIQSLSDLGQSPLEIGVQDTQY------NKIYFTES-TDPVTKNLYHKKIAS 520
            ::.::|  |..:..|:.:..|..|...|||||..:      |::....| ..|:.....:.....
plant   688 SLTSILTVQQLTSRIEGMDTLIASNEPIGVQDGTFAWKFLVNELNIAPSRIIPLKDEEEYLSALQ 752

  Fly   521 KG-----------ENIYMRPLL----------GMEKMRTGL-FAYQ 544
            :|           |..|::.||          |.|..|||. ||:|
plant   753 RGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFAFQ 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 18/103 (17%)
Lig_chan 386..643 CDD:459656 42/197 (21%)
GLR3.5NP_001324013.1 PBP1_GABAb_receptor_plant 49..444 CDD:380645 54/267 (20%)
GluR_Plant 485..828 CDD:270404 66/322 (20%)

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