DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and GLR2.7

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:392 Identity:77/392 - (19%)
Similarity:138/392 - (35%) Gaps:106/392 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 MSYNTYQTVNYGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFR 370
            |.|..|          .|::|.::|       |:..:|     :|...|||..........:|. 
plant   525 MVYQVY----------TGAYDAVVG-------DVTIVA-----NRSLYVDFTLPYTESGVSMMV- 566

  Fly   371 QPPLSAVAN--IFAMPFENDVWVSILMLLI-ITTVVLVLEL-----FFSPHNHDMS-----YMDT 422
              ||....|  :|..|:..|:||:.....: |..:|.:||.     |..|.:|.:.     ...|
plant   567 --PLKDNKNTWVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFST 629

  Fly   423 LNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANI-----VALLQSPSDAIQSLSD 482
            :||        ....:|.:..||.:|.......|.|..|::||:     |.|||   ..:.:..|
plant   630 MNF--------AHREKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQ---PTVTNWKD 683

  Fly   483 LGQSPLEIGVQ-DTQYNKIYFTESTD-----PVTKNLYHKKIASKG-------ENIYMRPLLGME 534
            |.:....||.| .|...::..::..|     |....:...::.|.|       |..|::.:|...
plant   684 LIKFNKNIGYQRGTFVRELLKSQGFDESQLKPFGSAVECDELFSNGTITASFDEVAYIKVILSQN 748

  Fly   535 KMRTGLFAYQVELQAGYQIVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFPYKELIRRQLRWQR 599
            ..:             |.:|..:|   :..|.    .|..|       |..|..:.:.|.:....
plant   749 SSK-------------YTMVEPSF---KTAGF----GFVFP-------KKSPLTDDVSRAILNVT 786

  Fly   600 EVSLVNREERKWIPQKPKCEGGVGGFVSIGITECRYAL----GIF---GCGAAVSFVLFLFEFIF 657
            :...:...|.||..:...|..     ::..::....:|    |:|   |..:.::.::|:..|::
plant   787 QGEEMQHIENKWFKKPNNCPD-----LNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLY 846

  Fly   658 RH 659
            .|
plant   847 EH 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 13/65 (20%)
Lig_chan 386..643 CDD:459656 56/292 (19%)
GLR2.7NP_180476.3 PBP1_GABAb_receptor_plant 40..423 CDD:380645
GluR_Plant 460..799 CDD:270404 68/336 (20%)
Lig_chan 582..832 CDD:459656 56/292 (19%)
Blue background indicates that the domain is not in the aligned region.

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