DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grik5

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:661 Identity:148/661 - (22%)
Similarity:259/661 - (39%) Gaps:162/661 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 FYVQVSTESSLRDLQHVDALDEHKDAPPPKSFHANNSTHWETSFLLPALPYKMGILLLEFSSECA 152
            ||..:.|......|...|.:||..:.   ..|...|:||          |:     .|||..  :
Zfish   252 FYKYILTTMDFPLLWLDDIVDEQSNI---VGFSMFNTTH----------PF-----YLEFIR--S 296

  Fly   153 LNLLRWSAASEHNYFTTNRFWLLLTEDPG----DIDLLEDPEIFIPPDSELRVLHYENVGNFSC- 212
            || |.|....:.|.:            ||    ...|.:...:.:....||.......|...|| 
Zfish   297 LN-LSWREGCDINPY------------PGPALSSALLFDAVHVVVSAVQELNRSQEIGVKPLSCT 348

  Fly   213 ---------SLIDLYKVAAWKPLKRTLVGHNIRNSR--HVIHALQ-HFGSAITYRQDLEGIVF-N 264
                     ||::..::..:..|... |..|.:..|  :.:|.|: |.|.    .::: ||.: |
Zfish   349 SPQIWQHGTSLMNYLRMVEYDGLTGR-VEFNSKGQRTNYTLHILEKHRGG----HKEI-GIWYSN 407

  Fly   265 SAIVIAFPDLFTNI-EDLSLRH--IDTI-------SKVNHR--------------LMLELANRLN 305
            :.:::....|..|: |.|:.:.  |.||       .|:|::              ::.||::.|.
Zfish   408 NTLLMNSTSLDINVSETLANKSLIITTILENPYVMRKINYQEFEGNEQYEGFCVDMLRELSDILK 472

  Fly   306 MSYNTYQTVN---YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDF--------VAE 359
            .:|. .:.|:   ||..:||||:.|::|.....:.|||..|..:..:|..::||        ::.
Zfish   473 FTYR-IKLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISI 536

  Fly   360 TYRVRAGIMFRQPPLSAVANIFAMPFENDVWVSILMLLIITTVVLVLEL------FFSPHNHDMS 418
            .|||..|   |:|...:    |..||...||:.:|:..:..:.||.|..      :::||.....
Zfish   537 LYRVHIG---RKPGYFS----FLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPCLRE 594

  Fly   419 YMDTL-------NFVW---GAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL--Q 471
            ..|.|       |.:|   |...|||..:..|..|.|.:....:...|.:.:|::||:.|.|  |
Zfish   595 RRDLLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 659

  Fly   472 SPSDAIQSLSDLG-QSPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYMRPL-LGME 534
            .....|:|..||. |:.::.|.........:|..|.....:.::: .:.||..:::::.. .|:.
Zfish   660 RMEVPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWN-YMYSKQPSVFVKSTEEGIA 723

  Fly   535 KMRTGLFAYQVELQAGYQIVSDTFSEPEK---C------GLMELEPFQLPM-LAIPTRKNFPYKE 589
            ::....:|:.:|         .|.:|..:   |      ||::.:.:.:.| |..|.|.......
Zfish   724 RVVNSKYAFLLE---------STMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDELSLAV 779

  Fly   590 LIRRQLRWQREVSLVNREERKWIPQK-PKCEG----GVGGFVSIGITECRYALGIFG---CGAAV 646
            |   ||:....:.::.|  |.|...| ||.|.    |: |..:||        |||.   ||..:
Zfish   780 L---QLQENNRLEILKR--RWWEGGKCPKEEDHRAKGL-GMENIG--------GIFVVLICGLII 830

  Fly   647 SFVLFLFEFIF 657
            :..:.:.||::
Zfish   831 AVFVAVMEFVW 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 57/212 (27%)
Lig_chan 388..644 CDD:278489 66/293 (23%)
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 41/198 (21%)
ANF_receptor 55..392 CDD:279440 35/173 (20%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 11/70 (16%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 87/392 (22%)
Lig_chan 558..828 CDD:278489 66/293 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591574
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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