DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grin3a

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_073770471.1 Gene:grin3a / 564832 ZFINID:ZDB-GENE-130530-780 Length:1117 Species:Danio rerio


Alignment Length:786 Identity:151/786 - (19%)
Similarity:274/786 - (34%) Gaps:212/786 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RSEYSRQD----------PDPKTRWGNQLPDMLVAYYRHHGVHSLMLVVC-HTDIADFRLWKLWQ 81
            :||:.||.          .:|:|...|    ::.:....:....:.||:| ..:|:||    ::.
Zfish   230 QSEFQRQTQNLLHFQMAMQNPQTSQAN----LIFSLLSMNNWFDVSLVMCQQMNISDF----VFL 286

  Fly    82 HFNLNNFY----VQVSTESSLRDLQHV---DALDEHKDAPPP--------KSFHANNSTHWETSF 131
            ..|.:.|:    :::||.||.::..|:   ..|:..||:...        :......:|..:...
Zfish   287 LHNNSKFHLGTVLKISTNSSSKNDFHIFLQAQLESIKDSTSTLVTFGCDIRDIRRIFTTIAKFGL 351

  Fly   132 LLP------------------ALPYKMGILL--------LEFSSECALNLLRWSAASEHNYF--- 167
            :||                  .||  ||:|.        |:...:.||.|:..:..|.....   
Zfish   352 ILPDYHWIIGDSQNVEELRTEGLP--MGLLAHGRMGEPSLDHYVQDALELVARAVGSAATVSPQL 414

  Fly   168 -----TTN-----------------RFWLLLTED--PGDIDLLEDPEIFIPPDSELRVLHYENVG 208
                 |||                 |:....:.|  .|.|.:.|:..|.......:..|.::.:|
Zfish   415 ALIPGTTNCLARLEAKNLTSGTFLSRYMASTSFDGLSGCISVQEESTIISESHHFIWNLQHDPIG 479

  Fly   209 NFSCSLIDLYK-------VAAWKPLKRTLVG----HNIRNSRHVIHALQHFGSAITYRQDL--EG 260
            ....:.:..:|       ...|...:|:..|    |:.|....|:..::|   ...:.:|:  ||
Zfish   480 KPMWTRLGSWKHGKVVMDYGVWPNKRRSQPGADWRHSSRLHLRVVTLVEH---PFVFTRDVDDEG 541

  Fly   261 IVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHRLMLE---------------LANRLNMSYNT 310
            :.....:.:   |..||...|.......:...|..:.||               ||..:...::.
Zfish   542 LCPAGQLCL---DPLTNDTALLESLFQGLQGANDTVPLEFKKCCYGYCIDLLEKLAEDMGFDFDL 603

  Fly   311 YQTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPP 373
            |...:  || ...||.:.||:|........||..:..:...|..::||.:..:....||:.|...
Zfish   604 YIVGDGKYG-AYKNGRWTGLVGDLMSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRD 667

  Fly   374 LSAVANIFAMPFENDVWVSILMLLIITTVVLVLELFFSP-------HNHD--MSYMDTLNFVWGA 429
            .:|....|..|....:|:.|.:.|.:|.|.|.|..:.||       .|.|  .|:...||     
Zfish   668 TAAPIGAFMWPLHWSMWLGIFVSLHVTAVFLTLYEWKSPFGMTPRGRNRDRVFSFSSALN----- 727

  Fly   430 MCQQGFYVEVRNRSA----------RIIVFTTFVAALFLFTSFSANIVALLQSPSDAIQSLSDLG 484
            :|    |..:..|:|          |.::....:..||..::::||:.|::.. ....:.||.:.
Zfish   728 VC----YAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVG-EKTYEQLSGIH 787

  Fly   485 QSPLEIGVQDTQYNKIYFTESTDPVTKNL--YHKKIASKGENIYMR----PLL--GMEKMR---- 537
            ...|....|..::..:..:.:.|.|.|:.  .|:         |||    |..  |::.::    
Zfish   788 DPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHE---------YMRRYNAPTTPDGIDHLKDDPQ 843

  Fly   538 --------TGLFAYQVELQAGYQIVSDTFSEPEKCGLMEL-EPFQLPMLAIPTRKNFPYKELIRR 593
                    ..|..|:|.:.|             .|.::.: :||.:....|..::|.|....|..
Zfish   844 KLDAFIMDKALLDYEVSIDA-------------DCKMLTVGKPFAIEGYGIGLKQNSPLTSNISE 895

  Fly   594 QLRWQREVSLVNREERKWIPQKPKCEGGVGGFVSIGITE-----CRYALGIFG--C-GAAVSFVL 650
            .:...:....::....||....| |     |..|..:||     .::..|:|.  | |.|:|.:.
Zfish   896 LVSQYKSDGFMDMLHDKWYKVVP-C-----GKRSFAVTETLQMGIKHFSGLFVMLCVGVALSLLT 954

  Fly   651 FLFEFI 656
            .|.|.|
Zfish   955 TLGEHI 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 19/89 (21%)
Lig_chan 386..643 CDD:459656 59/304 (19%)
grin3aXP_073770471.1 None

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