DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grin2aa

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_021329529.1 Gene:grin2aa / 563297 ZFINID:ZDB-GENE-070424-129 Length:1460 Species:Danio rerio


Alignment Length:578 Identity:108/578 - (18%)
Similarity:200/578 - (34%) Gaps:161/578 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 NRFWLLLTEDPGDIDLLED-----PE---IFIPPDSELRVLHYENVGNFSCSLIDLYKVAAWKPL 226
            :::.:.:|.|..|:...||     |:   |.:..|.|     :|.:|.:....:.| |...|...
Zfish   332 HKYMMNVTWDGKDLSFTEDGYQVHPKLVVIVLNKDRE-----WEKMGKWENQSLTL-KYPVWPRF 390

  Fly   227 KRTLVGHNIRNSRHVIHALQHFGSAITYRQDLEGIVFNSAIVIAFPDLFTNIEDLS--------- 282
                      ||         ||.|.|....|..:.......:    :..|:|.|:         
Zfish   391 ----------NS---------FGDAETDDNHLTIVTLEEKPFV----IVENVERLTGTCMRNSVP 432

  Fly   283 -LRH---------------------IDTISKVNHRLMLELANRLNMSYNTYQTVN--YGWRQPNG 323
             .:|                     ||.:.|:        |..:..:|:.|...|  :| ::.|.
Zfish   433 CRKHIKDNTTEGGGTYIKKCCKGFCIDILKKI--------ARNVKFTYDLYLVTNGKHG-KKINN 488

  Fly   324 SFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVANIFAMPFEND 388
            .::|::|.....:..:|..::.:..:|..::||..........:|..:...:...:.|..||...
Zfish   489 VWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSAS 553

  Fly   389 VWVSI-LMLLIITTVVLVLELFFS-------------PHNHDMSYMDTLNFVWGAMCQQGFYVEV 439
            |||.: :|||::|.:.:.:..:.|             ||....:....:..:||.:....  |.|
Zfish   554 VWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNS--VPV 616

  Fly   440 RN----RSARIIVFTTFVAALFLFTSFSANIVALL--QSPSDAIQSLSDLG-QSPLEIGVQDTQY 497
            :|    .|..|:....|.|.:|| .|::||:.|.:  :...|.:..|||.. |||......    
Zfish   617 QNPKGTTSKFIVSVWAFFAVIFL-ASYTANLAAFMIQEEFVDQVTGLSDKKFQSPYSYSPP---- 676

  Fly   498 NKIYFTESTDP-------VTKNL-----YHKKIASKGENIYMRPLLGMEKMRTGLFAYQ------ 544
                |...|.|       :.||.     |..|....|.|   ..|:.::..:...|.|.      
Zfish   677 ----FRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVN---DALVSLKTGKLDAFIYDAAVLNY 734

  Fly   545 ----------VELQAGYQIVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFPYKELIRRQLRWQR 599
                      |.:.:||...:..:....:.|.:...|..|.:|||     ....|:...:.:|. 
Zfish   735 MAGRDEGCKLVTIGSGYIFATTGYGIALQKGSLWKRPVDLAILAI-----IGDGEMEELEAQWL- 793

  Fly   600 EVSLVNREERKWIPQKPKCEGGVGGFVSIGITECRYALGIFGCGAAVSFVLFLFEFIF 657
             ..:.:.|:.:.:..:...:...|.|..:..     |:|:       |.:.|::|.:|
Zfish   794 -TGICHNEKNEVMSSQLDVDNMAGVFYMLAT-----AMGL-------SLITFVWEHLF 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 13/74 (18%)
Lig_chan 386..643 CDD:459656 60/305 (20%)
grin2aaXP_021329529.1 PBP1_iGluR_NMDA_NR2 33..384 CDD:380601 12/57 (21%)
PBP2_iGluR_NMDA_Nr2 400..799 CDD:270436 79/432 (18%)
NMDAR2_C 836..1460 CDD:463148 1/3 (33%)

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