DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grik1b

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:537 Identity:109/537 - (20%)
Similarity:207/537 - (38%) Gaps:98/537 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 HYENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIRNSRHVIHALQHFG-SAITYRQD-----LEGI 261
            |......|....|.::|.|.|..|...::.:.....|      :.|. ..|:.::|     ||..
Zfish   376 HRHKPWRFGSRFISMFKEAQWNGLTGQIIINKTDGLR------KDFDLDIISLKEDGLEKPLESG 434

  Fly   262 VFNSA--------------IVIAFPDLFTNIEDLSLRHIDTISKV-----------------NHR 295
            .||..              :..:..|..||:.|........::.:                 |.|
Zfish   435 RFNKVWKKIGVWNSNTGLNLTDSNKDKNTNVTDSMANRTLIVTTILENPYVMYKKSDKPLYGNDR 499

  Fly   296 -------LMLELANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRI 351
                   |:.||:|.|..||......:  ||.:...|.::|::.....:..|||...:.:...|.
Zfish   500 FEGYCLDLLKELSNILGFSYEVKLVTDGKYGAQNDKGEWNGMVRELIDHVADLAVAPLTITYVRE 564

  Fly   352 ALVDFVAETYRVRAGIMFRQPPLSAVANIFAM--PFENDVWVSILMLLI-ITTVVLVLELF---- 409
            .::||......:...|::.:|. .....:|:.  |...|:|:.:|:..: ::.|:.|:..|    
Zfish   565 KVIDFSKPFMTLGISILYHKPN-GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYE 628

  Fly   410 -FSPH--NHDMSYMDT----LNFVW---GAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSA 464
             ::||  |.|...::.    :|.||   ||:.|||..:..:..|.||:....:...|.:.:|::|
Zfish   629 WYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTA 693

  Fly   465 NIVALL-----QSPSDAIQSLSDLGQSPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGEN 524
            |:.|.|     .||.|:...|:.  |:.:|.|.........:|.:|.....:.::....:.|...
Zfish   694 NLAAFLTVERMDSPIDSADDLAK--QTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTA 756

  Fly   525 IYMRPLLGMEKMRTGLFAYQVELQAGYQIVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFPYKE 589
            :......|::::.|..:|..:|..:...|.....:..:..||::.:.:     .:.|....||::
Zfish   757 LVKNNREGIQRVLTTDYALLMESTSIEYISQRNCNLTQIGGLIDSKGY-----GVGTPIGSPYRD 816

  Fly   590 LIR-RQLRWQREVSLVNREERKW----IPQKPKCEGGVGGFVSIGITECRYALGIF---GCGAAV 646
            .:. ..|:.|.|..|...:|:.|    .|::...|....|..:||        |||   ..|..:
Zfish   817 KVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIG--------GIFIVLAAGLVL 873

  Fly   647 SFVLFLFEFIFRHFKQV 663
            |..:.:.|||::..|.:
Zfish   874 SVFVAIGEFIYKSRKNL 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 51/207 (25%)
Lig_chan 388..644 CDD:278489 61/283 (22%)
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 15/84 (18%)
ANF_receptor 80..423 CDD:279440 10/52 (19%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 75/376 (20%)
Lig_chan 602..871 CDD:278489 61/283 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591527
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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