DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grin2bb

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001121809.1 Gene:grin2bb / 559976 ZFINID:ZDB-GENE-061207-27 Length:1770 Species:Danio rerio


Alignment Length:420 Identity:89/420 - (21%)
Similarity:159/420 - (37%) Gaps:87/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 IDTISKVNHRLMLELANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRL 348
            ||.:.|:        |..:..:|:.|...|  :| ::.||:::|::|........:|..::.:..
Zfish   541 IDILKKI--------AKSVKFTYDLYLVTNGKHG-KKINGTWNGMVGEVVLKNAHMAVGSLTINE 596

  Fly   349 DRIALVDFVAETYRVRAGIMFRQPPLSAVANIFAMPFENDVWVSI-LMLLIITTVVLVLELFFSP 412
            :|..::||..........:|..:...:...:.|..||..||||.: :||||::.|.:.:..:|||
Zfish   597 ERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSP 661

  Fly   413 HNHDMSYMD-------------TLNFVWGAMCQQGFYVEVRN---RSARIIVFT-TFVAALFLFT 460
            ..::....|             .:..:||.:....  |.|:|   .:::|:|.. .|.|.:|| .
Zfish   662 VGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNS--VPVQNPKGTTSKIMVSVWAFFAVIFL-A 723

  Fly   461 SFSANIVALL--QSPSDAIQSLSDLG-------QSPLEIGVQDTQYNKIYFTESTDPVTKNLY-- 514
            |::||:.|.:  :...|.:..|||..       ..|...|...        ..||:...:|.|  
Zfish   724 SYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVP--------NGSTERNIRNNYKE 780

  Fly   515 -HKKIASKGENIYMRPLLGMEKMRTGLFAYQVELQAGYQIVSDTFSEPEKCGLMELEPFQLPMLA 578
             |..:.|..:......|..::..:...|.|...: ..|....|     |.|.|          :.
Zfish   781 MHSYMTSFHQKNVNEALHSLKSGKLDAFIYDAAV-LNYMAGRD-----EGCKL----------VT 829

  Fly   579 IPTRKNFP---YKELIRRQLRWQREVSL----------VNREERKWIPQKPKCEGGVGGFVSIGI 630
            |.:...|.   |...|::...|:|.|.|          :...|..|:  ...|.......:|..:
Zfish   830 IGSGYIFATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWL--TGICHNEKNEVMSSQL 892

  Fly   631 TECRYALGIF---GCGAAVSFVLFLFEFIF 657
            .....| |:|   |...|:|.:.|:.|.:|
Zfish   893 DVDNMA-GVFYMLGAAMALSLITFIAEHLF 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 14/74 (19%)
Lig_chan 386..643 CDD:459656 64/302 (21%)
grin2bbNP_001121809.1 PBP1_iGluR_NMDA_NR2 107..465 CDD:380601
PBP2_iGluR_NMDA_Nr2 482..882 CDD:270436 79/378 (21%)
NMDAR2_C 919..1770 CDD:463148 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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