DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grid1b

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:618 Identity:136/618 - (22%)
Similarity:251/618 - (40%) Gaps:121/618 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VVCHTDIADFRLWKLWQHFNLNNFYV--QV------STESSLRDLQHVDALDEHKDAPPPKSFHA 121
            |..:.:|:|..:.:| .|.:|....|  |:      |:.|.:|:...:.:|.........:|...
Zfish   256 VFVNEEISDTEILEL-AHSSLGRMTVVRQIFPLWRDSSVSCMRNSHRISSLLCDPQEGYLQSLEV 319

  Fly   122 NNSTHWETSFLLPALPYKMGILLLE---FSSECALNLLRWSAASEHNYFTTNRFWLLL-TEDPGD 182
            :|...:::..:|....|:.    ||   :.|..:||.:|.|..      ..|..|.:| |...|.
Zfish   320 SNLYLYDSVLMLANAFYRK----LEDRKWHSMASLNCIRKSTK------PWNGGWSMLETIQKGR 374

  Fly   183 IDLLEDPEIFIPPDSELRVLHYENVG-NFSCSL-IDLYKVAAWKPLKRTLVGHNIRNSRHVIHAL 245
            |..|.....|:...|...| .:|.:| :||.:. .|:.::|.|..                :|.|
Zfish   375 ITGLTGIMDFMENGSNSHV-QFEILGTSFSETFGKDIKRLATWDS----------------VHGL 422

  Fly   246 QHFGSAITYRQDLEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHRLMLELANRLNMSYNT 310
            ............::|:...  :|....|.|..:.:..|.........:..::..||..|...|:.
Zfish   423 NGSLKESRIENGMQGVTVK--VVTLLEDPFVMVAENILGQPKRYKGFSIDVLEALAKILGFKYDI 485

  Fly   311 YQTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPP 373
            ||..:  ||.:..|||::|::|.......|||..||.:..:|..:|||.........||:.|:| 
Zfish   486 YQVADSKYGSQLSNGSWNGMIGELINKRADLAVSAITITPERENVVDFSKRYMDYSVGILHRKP- 549

  Fly   374 LSAVANIFAM--PFENDVWVSIL-------MLLIITTVVLVLELFFSPHNHDMSYM-----DTLN 424
             ....|||::  ||:..||..|.       :|:.:.|.:.:|.....|..|..|.|     ..:.
Zfish   550 -EEKINIFSLFAPFDLAVWACIAAAIPVVGVLIFLLTRMQMLRSQNPPGAHHASSMSNSLHSAIW 613

  Fly   425 FVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL--QSPSDAIQSLSDL---- 483
            .|:||..|||....|.:.:.||::.:.::..|.:.:|::||:.|.|  ....:.|::..||    
Zfish   614 IVYGAFVQQGGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDLARQM 678

  Fly   484 -------------------GQSPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYM-R 528
                               |.:|||   ||:.|.:::.|     ::||        .|::..: .
Zfish   679 DFAYGTVRDSAVYDYFKAKGTNPLE---QDSTYAELWRT-----ISKN--------NGQDFSVSS 727

  Fly   529 PLLGMEKMRTGLFAYQVELQ-AGYQIVSDTFSEPEKCGL------MELEPFQLPMLAIPTRKNFP 586
            |..|:.|.:.|.:|:..::. ..|..::|     :.|.:      |..:.:.:.|     :...|
Zfish   728 PSEGIRKAKKGPYAFLWDMAVVEYAALTD-----DDCTITVSGNSMSSKGYGIAM-----QHGSP 782

  Fly   587 YKELIRRQLRWQREVSLVNREERKWIPQKPKCE 619
            |::||.:::...:|...::..::||.|:..:|:
Zfish   783 YRDLISQKILELQEKGDLDVLKQKWWPRTGRCD 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 57/201 (28%)
Lig_chan 388..644 CDD:278489 58/277 (21%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..424 CDD:107387 42/195 (22%)
ANF_receptor 36..400 CDD:279440 34/155 (22%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:304360 92/401 (23%)
Lig_chan 565..840 CDD:278489 58/277 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591121
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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