DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grid2

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:645 Identity:139/645 - (21%)
Similarity:267/645 - (41%) Gaps:124/645 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VVCHTDIADF-----------RLWKLWQHFNLNNFYVQVSTESSLRDLQHVD-ALDEHKDAPPPK 117
            ::.:.:|:|.           ||..:.|.|.|    .|.:::..:|:...:: :|.:.|| |..:
Zfish   259 IIINEEISDMDVQELVMKSIGRLTLVRQTFPL----PQNTSQRCVRNNHRINTSLCDPKD-PKAQ 318

  Fly   118 SFHANNSTHWETSFLLPALPYKMGILLLEFSSECALNLLR-----WSAASEHNYFTTNRFWLLLT 177
            .....|...::|..|| |..:...:...::.|..:|:.:|     |.....          :|.|
Zfish   319 MLEITNRYIYDTVLLL-ANTFHRKLEDRKWHSMASLSCIRKGSKPWQGGKS----------MLET 372

  Fly   178 EDPGDI----DLLEDPEIFIPPDSELRVLHYENVG-NFSCSLID----LYKVAAWKP---LKRTL 230
            ...|.:    .|||..:....|:     :|:|.:| |:.   .|    :.::|.|.|   |..||
Zfish   373 VKKGGVSGLTSLLEFNDNGSNPN-----IHFEILGTNYG---EDRGRGVSRLATWDPIHGLNGTL 429

  Fly   231 VGHNIRNSRHVIHALQHFGSAITYRQDLEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHR 295
            ....:.|                   ::.|:|.....|:..|  |..:.:..|.........:..
Zfish   430 TDRKLEN-------------------NMRGVVLRVVTVLEEP--FVMVSENVLGKPKKYQGFSID 473

  Fly   296 LMLELANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGR--FQRYELDLAQLAIFMRLDRIALVDF 356
            ::..|||.|...|..|...:  ||.:|.:|:::||:|.  |:|.::.|:.|.|  ..:|.::|||
Zfish   474 VLDALANYLGFKYEIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGLSALTI--TPERESVVDF 536

  Fly   357 VAETYRVRAGIMFRQPPLSAVANIFA--MPFENDVWVSIL-MLLIITTVVLVLELFFSPHNHDM- 417
            .........|::.|:  .....::||  .||:..:|..|. .:|::.|:|.:|. :.:|....| 
Zfish   537 TTRYMDYSVGVLLRK--AERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLN-WLNPPRLPMG 598

  Fly   418 -----SYMDTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL--QSPSD 475
                 :..:::.||:|:..|||..|.....:.|:::...::.||.:.:|::||:.|.|  ....:
Zfish   599 SVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIEN 663

  Fly   476 AIQSLSDLGQ-------SPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKG-ENIYMRPLLG 532
            :||||.||.:       :.|:..|.|...:|.......||:...::.....:.| ||.......|
Zfish   664 SIQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPFERDPMYSQMWRMINRTGGAENNVEESKEG 728

  Fly   533 MEKMRTGLFAYQVELQA-GYQIVSDTFSEPEKCGLMEL------EPFQLPMLAIPTRKNFPYKEL 590
            :.|::.|.||:..:... .|..::|     |.|.|..:      ..:.:.|     :...||:::
Zfish   729 IRKVKYGRFAFVWDAAVLEYVAIND-----EDCSLYTVSNNVADRGYGMAM-----QHGSPYRDI 783

  Fly   591 IRRQLRWQREVSLVNREERKWIPQKPKCEGGVGGFVSIGITECRYALGIFGCGAAVSFVL 650
            ..:::...::...::..:.||.|:...|:    .:..:|..:...||.|... |.|.|||
Zfish   784 FSQRILELQQNGDMDILKLKWWPRDSPCD----LYSPVGTRKSGSALDIHSF-AGVFFVL 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 55/198 (28%)
Lig_chan 388..644 CDD:278489 59/279 (21%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 38/191 (20%)
ANF_receptor 42..404 CDD:279440 32/165 (19%)
PBP2_iGluR_delta_2 440..806 CDD:270449 87/382 (23%)
Lig_chan 568..841 CDD:278489 64/287 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591510
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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