DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and GluRIID

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:540 Identity:108/540 - (20%)
Similarity:218/540 - (40%) Gaps:99/540 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LHYENVGN----FSCSLID-----LYKVAAWKPLKRTLVGHNIRNSRHVIHALQHFGSAITYRQD 257
            :::|  ||    |:..:|:     |.||..|:..|.              ...|....|:.:...
  Fly   362 IYFE--GNVRKGFTFDVIELQTSGLVKVGTWEEGKD--------------FEFQRPPQAVNFNDI 410

  Fly   258 LEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNH------RLMLELANRLNMSY------NT 310
            .:|.:.|...::.. .:.|......:..|||:...|.      .|:.|||::|..::      |.
  Fly   411 DDGSLVNKTFIVLI-SVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFRDGGND 474

  Fly   311 YQTVNYGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLS 375
            |.:.|    :...|..|::........|||...:.:..:|..::||......:...|::.:|..:
  Fly   475 YGSFN----KTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKA 535

  Fly   376 AVANI-FAMPFENDVWVSILMLLIITTVVLVLELFFSPHNHDMSY-----------MDTLN---- 424
            ..|.. |..||.::||:.:.:..:..::...:....||...|..|           ..|:|    
  Fly   536 PPALFSFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLW 600

  Fly   425 FVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL--QSPSDAIQSLSDL--GQ 485
            |..||:.|||..:..:..|.|.|....:...|.:.:|::||:.|.|  ::|:..|.|:.||  .:
  Fly   601 FTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNK 665

  Fly   486 SPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYMRPLLGMEKMRTGL-FAYQVELQA 549
            ..::.|.:.|...:.:|:.|.:|:...: ::.:.:..|.:......|::|:::|. :|:.:|   
  Fly   666 DDVQYGAKRTGSTRNFFSTSEEPIYIKM-NEYLNAHPEMLMENNQQGVDKVKSGTKYAFLME--- 726

  Fly   550 GYQIVSDTFSEPEKCGLMEL-EPFQLPMLAIPTRKNFPYKELIRRQLRWQREVSLVNREERKWIP 613
               ..|..|:...:|.|.:: :|.......|...||:||::...:.|...:|..::.|.:.||..
  Fly   727 ---STSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWWN 788

  Fly   614 QKPKCEGGVG---------GFVSIGITECRYALGIFGCGAAVSFVLFLF---EFIFRHFK----- 661
                 |.|.|         |...:|:........:...|:.:|.::.:.   .|:::..|     
  Fly   789 -----EVGAGVCSAKSDDDGPSELGVDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVP 848

  Fly   662 ------QVYRIIKGYREVQR 675
                  :.:||:..:.|.:|
  Fly   849 FCDALAEEFRIVIRFSENER 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 47/207 (23%)
Lig_chan 388..644 CDD:278489 59/285 (21%)
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 10/50 (20%)
ANF_receptor 46..380 CDD:279440 5/19 (26%)
PBP2_iGluR_Kainate 417..788 CDD:270432 82/382 (21%)
Lig_chan 549..819 CDD:278489 59/281 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462823
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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