DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75d and Ir25a

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:837 Identity:150/837 - (17%)
Similarity:302/837 - (36%) Gaps:248/837 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FLLVSGTPRVAGS---------WR------SEYSRQDPDPKTRWGNQLPDMLVAYYRHHGVHSLM 63
            |....|.|.::.|         ||      .:|..|...|    .:.:|:.:.:...|..:.:..
  Fly   122 FTQALGLPTISASYGQQGDLRQWRDLDEAKQKYLLQVMPP----ADIIPEAIRSIVIHMNITNAA 182

  Fly    64 LVVCHTDIADFRLWKLWQ---------------------------HFNLNNFYVQVSTESSLRDL 101
            ::...:.:.|.:...|.|                           :.::|||:: :.|..|:|.:
  Fly   183 ILYDDSFVMDHKYKSLLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFI-LGTLQSIRMV 246

  Fly   102 QHVDALDEHKDAPPPKSF--HANNSTHWETS---------FLLPALPY-----KMGILLLEFSSE 150
                 |:..|.|...::|  ||......|.|         |:.| :.|     ::|:|...:   
  Fly   247 -----LESVKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKP-MAYTQYRDRLGLLRTTY--- 302

  Fly   151 CALNLLRWSAASEHNYF-TTNRFWLLLTED------PGDIDLL--EDPEIFIPPDSELRVLHY-- 204
               ||......|...|| ...|.:|.:.|.      |.|::.|  :|.:....|...|.:..|  
  Fly   303 ---NLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFT 364

  Fly   205 -----ENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIRNSRHVIHALQ-HFGSAITYR---QDLEG 260
                 .:.|.|     ||. ..:.:|..    ||:.......|:.|| ..||::..:   :.:.|
  Fly   365 KITEPTSYGTF-----DLV-TQSTQPFN----GHSFMKFEMDINVLQIRGGSSVNSKSIGKWISG 419

  Fly   261 IVFNSAIVIAFPD------------LFTNIEDLSLRHIDTISKVNHRLMLELANRL----NMSYN 309
            :  ||.:::...:            :||.::...:...:|..|......::|.|.:    :..| 
  Fly   420 L--NSELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINEIAAIVHFDY- 481

  Fly   310 TYQTV---NYGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETY-RVRAGIMFR 370
            |.|.|   .:|....||.::|::.:....:.|:...::.:..:|..::||....| .|...||.:
  Fly   482 TIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQ 546

  Fly   371 QPPLSAVANIFAMPFENDVWVSILMLLIITTVVLVLELFFSPHNH--------------DMSYMD 421
            :|...:....|....|.:||:.||.....|:.::.:...:||:::              :.:..:
  Fly   547 RPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKE 611

  Fly   422 TLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVAL-----LQSPSDAIQSLS 481
            .|.|...::..||.....:|.|.|::..|.::....:..|::||:.|.     |.:|   ::||.
  Fly   612 CLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTP---VESLD 673

  Fly   482 DLGQSPLEIGVQDTQYNKIYF-TESTDPVTKNLYHKKIASKGENIY--------MRPLLGMEKMR 537
            ||.:          ||..:|. ...:..:|   |.:::::..:..|        ...|..:|:.:
  Fly   674 DLAK----------QYKILYAPLNGSSAMT---YFERMSNIEQMFYEIWKDLSLNDSLTAVERSK 725

  Fly   538 TGLFAYQV--------------ELQA----------------GYQIVSDT----FSEPEKCGLME 568
            ..::.|.|              :|.|                |:..:.|.    :.:...|.|..
  Fly   726 LAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQV 790

  Fly   569 L-EPFQLPMLAIPTRKNFPYKELIRRQLRWQREVSLVNREERKWIPQK--------PKCE----- 619
            : |.|.....||..::....|:.....:     ::|:|:.:.:.:.:|        .||:     
  Fly   791 VGEEFSRKPYAIAVQQGSHLKDQFNNAI-----LTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQ 850

  Fly   620 ---------GGVGGFVSIGITECRYALGIFGCGAAVSFVLFLFEFIFRHFKQVYRII 667
                     |||  |:.|.:            |..::.:..:||:.:..:::..|||
  Fly   851 SDGISIQNIGGV--FIVIFV------------GIGMACITLVFEYWWYRYRKNPRII 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 44/210 (21%)
Lig_chan 388..644 CDD:278489 56/340 (16%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 63/332 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 74/419 (18%)
Lig_chan 565..870 CDD:278489 56/339 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462981
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.