DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and GRIN2C

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:479 Identity:104/479 - (21%)
Similarity:175/479 - (36%) Gaps:119/479 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VQVSTES-------SLRDLQHVDALDEHKDAPPPKSFHANNSTHWETSFLLPALPYKMGILLLEF 147
            :.|.|||       .:||...:.||..|              ::|.....||| |          
Human   349 ISVVTESWRLSLRQKVRDGVAILALGAH--------------SYWRQHGTLPA-P---------- 388

  Fly   148 SSECALNLLRWSAASEHNYFTTNRFWLLLTEDPGDIDL-----LEDPEIFIPPDSELRVLHYENV 207
            :.:|.::....|.|.|..|    |..|.:|.:..|...     |..|.:.:...:..|:  :|.|
Human   389 AGDCRVHPGPVSPAREAFY----RHLLNVTWEGRDFSFSPGGYLVQPTMVVIALNRHRL--WEMV 447

  Fly   208 GNFSCSLIDLYKVAAWKPLKRTLVGHNIRNSRHV-IHALQHFGSAITYRQD--LEGIV------- 262
            |.:...::.: |...|.....:|  ..:.:|||: :..|:.....|....|  ..|.|       
Human   448 GRWEHGVLYM-KYPVWPRYSASL--QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCR 509

  Fly   263 ------FNSAIVIAFPDL----FTNIEDLSLRHIDTISKVNHRLMLELANRLNMSYNTYQTVN-- 315
                  |:|..|..:..|    |.         ||.:.|        ||..:..||:.|...|  
Human   510 RQSNHTFSSGDVAPYTKLCCKGFC---------IDILKK--------LARVVKFSYDLYLVTNGK 557

  Fly   316 YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVANI 380
            :| ::..|.::|::|.......|:|..::.:..:|..:|||..........:|..:...:...:.
Human   558 HG-KRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSA 621

  Fly   381 FAMPFENDVWVS--ILMLLIITTVVLVLELFFSPHNHDMSYMDTLN-----------------FV 426
            |..|:...|||.  ::.|.::...|.:.| :|||    :||...|.                 .:
Human   622 FLEPYSPAVWVMMFVMCLTVVAITVFMFE-YFSP----VSYNQNLTRGKKSGGPAFTIGKSVWLL 681

  Fly   427 WGAMCQQGFYVE-VRNRSARIIVFT-TFVAALFLFTSFSANIVALL--QSPSDAIQSLSDLGQSP 487
            |..:......:| .|..:::|:|.. .|.|.:|| .|::||:.|.:  :...|.:..|||.....
Human   682 WALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFL-ASYTANLAAFMIQEQYIDTVSGLSDKKSLH 745

  Fly   488 LE-IGVQDTQYNKI---YFTESTD 507
            || .||..|.:...   ||....|
Human   746 LENTGVAWTAFKTFCSDYFQRPQD 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 47/208 (23%)
Lig_chan 388..644 CDD:278489 37/147 (25%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156118
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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