DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75d and GRID1

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:661 Identity:144/661 - (21%)
Similarity:257/661 - (38%) Gaps:141/661 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KTRWGNQLPDML---VAYYRHHGVHSLMLVVCHTDIADFRLWKLWQHFNLNNFYVQVSTESS--- 97
            ||...|:..|.|   :......|.||.:.....|::|           :.::.:|.|:.|.|   
Human   213 KTEELNRYRDTLRRAILLLSPQGAHSFINEAVETNLA-----------SKDSHWVFVNEEISDPE 266

  Fly    98 LRDLQH-------------VDALDEHKDAPPPKSFHANNSTHWETSFLL-PALPYKM-------- 140
            :.||.|             ..|.|..|         ...:.|..:|.|. |...|..        
Human   267 ILDLVHSALGRMTVVRQIFPSAKDNQK---------CTRNNHRISSLLCDPQEGYLQMLQISNLY 322

  Fly   141 ---GILLLEFSSECALNLLRW-SAASEHNYFTTNRFW-----LLLTEDPGDI----DLLEDPEIF 192
               .:|:|..:....|...:| |.||.:....:.:.|     :|.|...|.|    .::|..|..
Human   323 LYDSVLMLANAFHRKLEDRKWHSMASLNCIRKSTKPWNGGRSMLDTIKKGHITGLTGVMEFREDS 387

  Fly   193 IPPDSELRVL---HYENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIRNSRHVIHALQH--FGSAI 252
            ..|..:..:|   :.|..|.      |:.|:|.|...|    |.|        .:||.  .||. 
Human   388 SNPYVQFEILGTTYSETFGK------DMRKLATWDSEK----GLN--------GSLQERPMGSR- 433

  Fly   253 TYRQDLEGIVFNSAIVIAFPDLFT--NIEDLSLRH----IDTISKVNHRLMLELANRLNMSYNTY 311
                 |:|:......|:..|.:..  ||.....|:    ||.:.        .||..|...|..|
Human   434 -----LQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLD--------ALAKALGFKYEIY 485

  Fly   312 QTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPL 374
            |..:  ||.:..|.|::|::|.......|||..||.:..:|.::|||.........||:.::|..
Human   486 QAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEE 550

  Fly   375 S-AVANIFAMPFENDVWVSILMLL-IITTVVLVLELFFSPHNHDM-----SYMDTLN----FVWG 428
            . ::.::|| ||:..||..|...: ::..::.||....:......     |...||:    .|:|
Human   551 KISIFSLFA-PFDFAVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYG 614

  Fly   429 AMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL-----QSPSDAIQSLSDLGQSPL 488
            |..|||....|.:.:.||::.:.::..|.:.:|::||:.|.|     .:|....|.||.  |..:
Human   615 AFVQQGGESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSK--QVEM 677

  Fly   489 EIG-VQDTQYNKIYFTESTDPVTKN-----LYHKKIASKG--ENIYMRPLLGMEKMRTGLFAYQV 545
            ..| |:|:...:.:..:.|:|:.::     |: :.|:..|  :|....|..|:.|.:.|.:|:..
Human   678 SYGTVRDSAVYEYFRAKGTNPLEQDSTFAELW-RTISKNGGADNCVSSPSEGIRKAKKGNYAFLW 741

  Fly   546 ELQ-AGYQIVSDTFSEPEKCGLMEL-EPFQLPMLAIPTRKNFPYKELIRRQLRWQREVSLVNREE 608
            ::. ..|..::|     :.|.:..: .........|..:...||::|..:::...::...::..:
Human   742 DVAVVEYAALTD-----DDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLK 801

  Fly   609 RKWIPQKPKCE 619
            :||.|...:|:
Human   802 QKWWPHMGRCD 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 23/74 (31%)
Lig_chan 386..643 CDD:459656 53/259 (20%)
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 55/266 (21%)
PBP1_iGluR_delta_1 25..425 CDD:380615 50/249 (20%)
PBP2_iGluR_delta_1 436..806 CDD:270448 87/386 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.