DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and glr-8

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:483 Identity:116/483 - (24%)
Similarity:197/483 - (40%) Gaps:67/483 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 RTLVGHNIRNS--RHVIHALQ-----HFGSAITYR-------QDLEGIVFNSAIVIAFPDL--FT 276
            |||  :||..|  ..|.|..|     .:|.|.|..       .:::|......:....|..  :.
 Worm    17 RTL--NNILESINEKVAHPPQTSLTSDYGDAYTLSNEKHFSLSEMKGRTLKMVVPAIEPPYVNYV 79

  Fly   277 NIEDLSLRHIDTISKVNHRLMLELANRLNMSYNTYQTVNYGWRQ-PNGSFDGLMGRFQRYELDLA 340
            |..|.::........|...::.|:..|||::|.....:...|.: .|||:.|..|:..|.|:||.
 Worm    80 NFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGSTWGEYLNGSWTGAFGQLVRGEVDLL 144

  Fly   341 QLAIFMRLDRIALVDFVAETYRVR---AGIMFRQPPL--SAVANIFAMPFENDVWVSILMLLIIT 400
            .....|..||..:.|.   ||..:   .|||.|.|..  .....|...||..:|||....:::|:
 Worm   145 AGGAIMEYDRSVIADL---TYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILIS 206

  Fly   401 TVVLVLELFFSPHNHDMSYMDTLNFVW---GAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSF 462
            .|:.::........::...:.....:|   ....|||...:.|:.|.|::|...::|::.|..:|
 Worm   207 GVIFLVMTNIIRKVYEEMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATF 271

  Fly   463 SANIVALL-----QSPSDAIQSLSDL-GQSPLEIGVQDTQYNKI-YFTESTDPVTKNLYHKKIAS 520
            :.::|||.     ..|...|..|..| .|...||.:.:..:.:. ....|..||.::|:|:.|. 
 Worm   272 TGSLVALFAVDKTNVPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPVYRDLWHEMIV- 335

  Fly   521 KGENIYMRPLLGMEKMRTGLFAYQVELQAGYQIVSD----TFSEPEKCGLMELEPFQLPM-LAIP 580
               |..::.:.|:.:   |: |: |....||.::..    .|.....|.::......||: |:||
 Worm   336 ---NHKVKYVNGIAR---GV-AF-VRANPGYALLGPMATLNFYAYSDCKVILFNDGILPVYLSIP 392

  Fly   581 TRKNFPYKELIRRQLRWQREVSLVNRE-ERKWIP--------QK-PKCEG-GVGGFVSIGITECR 634
            ..||..|......::|     .:|.|. .:|||.        || .:|.. .:|....:.:...:
 Worm   393 LVKNSIYSPYFSTKIR-----EMVERGFTQKWIADYRSYVAMQKINECNSTTIGPKSYLDLKRAQ 452

  Fly   635 YALGIFGCGAAVSFVLFLFEFIFRHFKQ 662
            .|..:|..||.:...||:.||||:.|::
 Worm   453 GAFWVFLGGAGLGLALFVGEFIFKFFRE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 51/197 (26%)
Lig_chan 388..644 CDD:278489 61/281 (22%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 88/378 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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