DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and glr-7

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:570 Identity:112/570 - (19%)
Similarity:206/570 - (36%) Gaps:120/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SEHNYFTTNRFWLLLTEDPGDIDLLEDP------------EIFIPPDSELRVLHYENVGNFSCSL 214
            ||.|..||.|          || :|.||            .:|. .|.|:|:...:...:...:|
 Worm   291 SEPNITTTVR----------DI-ILNDPAHEYGNYTEAGLNMFF-QDVEVRIYKIDRDRDHEDAL 343

  Fly   215 IDLYKVAAWKPLKRTLVGHNIRNSRHVIHALQHFGSAITYRQDLEGIVFNSAIVIAFPDLFTNIE 279
            .: .:|..|.|:.:..|.:.                  |.:.|:..:.....:.:..|.......
 Worm   344 FN-KEVGVWSPISKLSVMYG------------------TLQVDVRNLNIFRVVTLIQPPFVQRTG 389

  Fly   280 DLSLRH----IDTISKVNHRLMLELANRLNMSYNTYQTV--NYGWRQPNGSFDGLMGRFQRYELD 338
            |....:    ||.|:      |:::  .:|.:|..|:..  ::|....||:::||:|.......|
 Worm   390 DPDTPYEGYCIDLIN------MIQV--EVNFTYTIYEVEDGSFGTMDDNGNWNGLIGALVSGSAD 446

  Fly   339 LAQLAIFMRLDRIALVDFVAETY-RVRAGIMFRQPPLSAVANIFAMPFENDVWVSILMLLIITTV 402
            :|...:.:..:|...|||....| .|...|:.::..:......|....|..||:.|:...:.|::
 Worm   447 IALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWPVWLCIVAAYLFTSI 511

  Fly   403 VLVLELFFSPHN--------------HDMSYMDTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFV 453
            :|.:...|||::              ...|..:.|.|...::..||.....:|.|.|::..|.::
 Worm   512 LLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWL 576

  Fly   454 AALFLFTSFSANIVAL-----LQSPSDAIQSLSDLGQ------SPLEIGVQDTQYNKIYFTESTD 507
            ....:..|::||:.|.     |:.|   |.||.||.:      :|::....:|.:.::...|.| 
 Worm   577 FGFIIIASYTANLAAFLTVSRLEQP---ISSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEET- 637

  Fly   508 PVTKNLYHKKIASKGENIYMRPLLGM------EKMRTGLFAYQVELQA----------------G 550
              ..|::.:...::..:...|..|.:      :|. |.::.|..|.:.                |
 Worm   638 --FYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKF-TNMWRYMQESKLPVNMDTAVDRVLNSVDG 699

  Fly   551 YQIVSDT----FSEPEKCGLMEL-EPFQLPMLAIPTRKNFPYKELIRRQ-LRWQREVSLVNREER 609
            :..:.|.    ::....|.|.:: ..|.....||..:.....|:.|... |....|..|...:|:
 Worm   700 FAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHILKDKISSAILMLLNERRLETLKEK 764

  Fly   610 KWI--PQKPKCEGGVGGFVSIGITECRYALGIFGCGAAVSFVLFLFEFIF 657
            .|.  |.|..|.........|.|........:...|.|:|.|...||:.:
 Worm   765 WWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIVTLAFEYYY 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 46/205 (22%)
Lig_chan 388..644 CDD:278489 58/310 (19%)
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556
PBP2_iGluR_putative 373..767 CDD:270435 78/408 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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