DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and glr-5

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_505244.1 Gene:glr-5 / 179251 WormBaseID:WBGene00001616 Length:932 Species:Caenorhabditis elegans


Alignment Length:795 Identity:159/795 - (20%)
Similarity:285/795 - (35%) Gaps:242/795 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QLPDMLVAYYRHHGVHSLMLVVCHTDIADFRLWKLWQ------HFNLNNFYVQVSTESSLRDLQH 103
            ||.:.:|..:.|...:.::||.    ..|.|:.:|.|      :.::..:.::|.....::..:.
 Worm   136 QLFEAVVDMFTHWRWNRIVLVY----EGDERIRRLEQLLESEEYASIRFYLIKVHDGDYMKAARQ 196

  Fly   104 VDALDE----HK-----------DAPPPKSFHANNSTHWETSFLLPALPYKMGILLLEF------ 147
            |..|:|    ||           |..|..::          :|||.:|  :||::.|:.      
 Worm   197 VKELEECRLLHKKDCSEFSRLLVDMNPEHTY----------TFLLASL--QMGLIELKHWFLLTN 249

  Fly   148 --SSECALNLLRWSAAS-------EHNYFTTNR--------------FWLLLTEDPGDIDLLEDP 189
              .|...:.|.|::.|.       :..:.|.||              .|.:.|::..::.::|..
 Worm   250 MELSTMDMELFRYNHARFISPYPVDSTFLTENRDAFNFSHFKEHITEKWAMKTDNSRNLKMMEAV 314

  Fly   190 EIFIPPDSELRVLHYENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIRNSRHVIHALQHFGSAITY 254
            ..|   |:   |..:.||.|...|.:.:..|      .:||...:.||||...|......:.:  
 Worm   315 FTF---DA---VYAFANVFNELSSHMQMNDV------PQTLCRKSSRNSRKYQHGRSLIDNIV-- 365

  Fly   255 RQDLEGIV--------------FNSAIV----------IAFPDLFTNI----------------- 278
            ..||.|:.              |:..|.          |.|.:..||:                 
 Worm   366 HNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEPATNVHVNMSGDSKAQLQRNVQ 430

  Fly   279 --EDLSLR-HIDTIS-------KVNH--------------RLMLELANRLNMSY-------NTYQ 312
              ::|... .:.||.       |.||              .|:.||:..|..:|       ..|.
 Worm   431 VSDELKPHFRVTTIMERPYVMLKKNHYELDANSKFEGFCIDLLAELSKDLGFTYTIHAVKDGKYG 495

  Fly   313 TVNYGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFR-----QP 372
            ...||    |||:||:||...|.|.::|...:.:...|...|||......:...|:::     ||
 Worm   496 NDKYG----NGSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQP 556

  Fly   373 PLSAVANIFAMPFENDVWVSILMLLIITTVVLVL---------ELFFS------PH--------- 413
            .|.:..|    |....:|.:|...:|..|:.:..         .|.||      ||         
 Worm   557 DLFSFLN----PLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQ 617

  Fly   414 ------NHDMSYMDTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALL-- 470
                  :::.|:.:|:.:|...|.:.|.....|..|.|::..|.:|..|.:.::::||:.|:|  
 Worm   618 EAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLAAVLTV 682

  Fly   471 QSPSDAIQSLSDL-GQSPLEIGVQDTQYNKIYFTESTDPVTKNL--YHKK----IASKGENIYMR 528
            ..|...|::|.|| .|:.:..|.........:|.||.......:  |.|.    :.|.|:     
 Worm   683 SRPYIPIKNLDDLANQTTISYGTIRGGSTMQFFQESRIAAHVKMWQYMKDKDVFVTSNGK----- 742

  Fly   529 PLLGMEKMRTGLFAYQVELQAGYQIVSDTFSEPEKCGLMEL------EPFQLPMLAIPTRKNFPY 587
               |:|:..:..:||.:|      ..|..:...:.|.|.::      :.:     .|...|...:
 Worm   743 ---GVERALSMNYAYLME------STSLEYETQQNCNLTQIGGVLGSKGY-----GIALAKKSEW 793

  Fly   588 KELIRRQLRWQREVSLVNREERKWIPQKPKCEGGVGGFVSIGITECRYAL------GIF---GCG 643
            .:.|.||:....:..::..::.||...|    |......:..:...|:||      |:|   |.|
 Worm   794 TDRISRQILLYAKRGIIEMKKTKWWRSK----GAACASTASAVKHDRFALSMYNVAGLFITLGVG 854

  Fly   644 AAVSFVLFLFEFIFR 658
            ..::.::.:||.|.|
 Worm   855 IVLAAIVVIFELIHR 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 54/227 (24%)
Lig_chan 388..644 CDD:278489 61/309 (20%)
glr-5NP_505244.1 PBP1_iGluR_delta_like 26..418 CDD:107376 59/311 (19%)
ANF_receptor 38..377 CDD:279440 53/270 (20%)
PBP2_iGluR_Kainate 438..819 CDD:270432 86/407 (21%)
Lig_chan 568..855 CDD:278489 61/309 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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