DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and Grik2

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_011241422.1 Gene:Grik2 / 14806 MGIID:95815 Length:943 Species:Mus musculus


Alignment Length:818 Identity:162/818 - (19%)
Similarity:287/818 - (35%) Gaps:254/818 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PDPKTRWGNQLPDMLVAYY--RHHGVHSLMLVVCHTDIADFRLWKLWQHFNLNNFY--------- 89
            |..:|||.:|:.|...::|  .:....||...:  .|:..|..||     .:...|         
Mouse   128 PHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAI--LDLVQFFKWK-----TVTVVYDDSTGLIRL 185

  Fly    90 ---VQVSTESSLR-DLQHVDALDEHKDAPP-------PKSFHANNSTHWETSFLLPALPYKMGIL 143
               ::..:..:|| .::.:.|  :.|||.|       .|.||                      :
Mouse   186 QELIKAPSRYNLRLKIRQLPA--DTKDAKPLLKEMKRGKEFH----------------------V 226

  Fly   144 LLEFSSECALNLLRWSAAS------EHNYFTT------------------NRFWLLLTE------ 178
            :.:.|.|.|..:|:.:.|.      .|..|||                  ..|.:|.||      
Mouse   227 IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSS 291

  Fly   179 --DPGDIDLLEDPEIFIPPDSEL--------RVLHYE---------------NVGNFSCS----- 213
              :...::.|:.|.   .|||.|        ..|.|:               .|.:..|:     
Mouse   292 IIEKWSMERLQAPP---KPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPW 353

  Fly   214 -----LIDLYKVAAWKPLKRTLVGHNIRNSR-----HVI----HALQHFG-----SAITYRQDLE 259
                 .:.|.|.|.|:.|...:..:.....|     .||    ..|:..|     |.:...:..:
Mouse   354 RFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQK 418

  Fly   260 GIVFN--------SAIVIAF---PDLFTNIEDLSLRHIDTISKVNHRLMLELANRLNMSY--NTY 311
            |...|        |.||...   |.:.....|..|...|........|:.||:..|..:|  ...
Mouse   419 GKPANITDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLV 483

  Fly   312 QTVNYGWRQP-NGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLS 375
            :...||.:.. ||.::|::.....::.|||...:.:...|..::||......:...|::|:|. .
Mouse   484 EDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPN-G 547

  Fly   376 AVANIFAM--PFENDVWVSILMLLIITTVVL---------------------------------- 404
            ....:|:.  |...|:|:.||:..:..:.||                                  
Mouse   548 TNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARQSKFSWFKYPNCSHYHHSQRCLCTQHLES 612

  Fly   405 VLEL-------FFSPH--NHDMSYMDT----LNFVW---GAMCQQGFYVEVRNRSARIIVFTTFV 453
            .:||       :::||  |.|...::.    ||..|   ||:.|||..:..:..|.||:....:.
Mouse   613 YMELCLFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWF 677

  Fly   454 AALFLFTSFSANIVALL-----QSPSDAIQSLSDLGQSPLEIGVQDTQYNKIYFTESTDPVTKNL 513
            ..|.:.:|::||:.|.|     :||.|:...|:.  |:.:|.|..:......:|.:|    ..:.
Mouse   678 FTLIIISSYTANLAAFLTVERMESPIDSADDLAK--QTKIEYGAVEDGATMTFFKKS----KIST 736

  Fly   514 YHKK---IASKGENIYMRP-LLGMEKMRTGLFAYQVELQAGYQIVSDT--FSEPEKC------GL 566
            |.|.   ::|:.:::.::. ..|::::.|..:|:.:|        |.|  |.....|      ||
Mouse   737 YDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLME--------STTIEFVTQRNCNLTQIGGL 793

  Fly   567 MELEPFQLPMLAIPTRKNFPYKELIR-RQLRWQREVSLVNREERKW----IPQKPKCEGGVGGFV 626
            ::.:.:     .:.|....||::.|. ..|:.|.|..|...:|:.|    .|::...|....|..
Mouse   794 IDSKGY-----GVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQ 853

  Fly   627 SIGITECRYALGIF---GCGAAVSFVLFLFEFIFRHFK 661
            :||        |||   ..|..:|..:.:.||:::..|
Mouse   854 NIG--------GIFIVLAAGLVLSVFVAVGEFLYKSKK 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 53/243 (22%)
Lig_chan 388..644 CDD:278489 69/330 (21%)
Grik2XP_011241422.1 PBP1_iGluR_Kainate 37..414 CDD:380605 58/319 (18%)
Periplasmic_Binding_Protein_Type_2 430..835 CDD:389745 88/424 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846549
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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