DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and Grik4

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_780690.2 Gene:Grik4 / 110637 MGIID:95817 Length:956 Species:Mus musculus


Alignment Length:743 Identity:155/743 - (20%)
Similarity:283/743 - (38%) Gaps:221/743 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VVCHTDIADFRLWKLWQHFNLNNFYVQVSTESSLRDLQHVDALDEHKDAPP-------PKS---- 118
            ::|........|.||.:.|.::            :|...|..||:.:|..|       .|:    
Mouse   164 LICAKAECLLNLEKLLRQFLIS------------KDTLSVRMLDDTRDPTPLLKEIRDDKTATII 216

  Fly   119 FHANNS-THWETSFLLPALPYKMGILL---------LEFS-------SECALNLLRWSAASE-HN 165
            .|||.| :|   :.||.|.  ::|::.         ||||       .:..:|:|.:|..:: |.
Mouse   217 IHANASMSH---TILLKAA--ELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHA 276

  Fly   166 YF-----TTNRFWLLLTED----PGDIDLLEDPEIF------IPPDSELRVLHYENVGNFSC--- 212
            :|     :.|:.|   .|:    |.....|....:|      :....||.......|...||   
Mouse   277 FFQEFSQSLNQSW---QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSA 338

  Fly   213 -------SLIDLYKVAAWKPLKRTLVGHNIRNSR-----HVIHALQ------------HFGSAIT 253
                   ||::..::...:    .|.||...||:     :.:..||            |....::
Mouse   339 QIWQHGTSLMNYLRMVELE----GLTGHIEFNSKGQRSNYALKILQFTRNGFQQIGQWHVAEGLS 399

  Fly   254 -----YRQDLEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHR--------------LMLE 299
                 |..::...:||:.:|:.     |.:|:..|     :.|.||:              ::.|
Mouse   400 MDSRLYASNISDSLFNTTLVVT-----TILENPYL-----MLKGNHQEMEGNDRYEGFCVDMLKE 454

  Fly   300 LANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDF------ 356
            ||..|..:|......:  ||..:.||::.|::|.....:.|||...:.:..:|..::||      
Mouse   455 LAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMT 519

  Fly   357 --VAETYRVRAGIMFRQPPLSAVANIFAMPFENDVWVSILMLLIITTVVLVLEL------FFSPH 413
              ::..|||..|   |:|...:    |..||...||:.:|:..:..:.||.|..      ::|||
Mouse   520 LGISILYRVHMG---RRPGYFS----FLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPH 577

  Fly   414 N----------HDMSYMDTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVA 468
            .          :..|..::|.|..|...|||..:..|..|.|.:....:...|.:.:|::||:.|
Mouse   578 PCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAA 642

  Fly   469 LL-----QSPSDAIQSLSDLGQSPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYMR 528
            .|     :.|.:::..|:|  |:.:|.|......:..:|..|.....:.::: .:.||..:::::
Mouse   643 FLTVQRMEVPIESVDDLAD--QTAIEYGTIHGGSSMTFFQNSRYQTYQRMWN-YMYSKQPSVFVK 704

  Fly   529 PL-LGMEKMRTGLFAYQVELQAGYQIVSDTFSE---PEKC------GLMELEPFQLPM-LAIPTR 582
            .. .|:.::....:|:.:|         .|.:|   ...|      ||::.:.:.:.| :....|
Mouse   705 STEEGIARVLNSNYAFLLE---------STMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFR 760

  Fly   583 KNFPYKELIRRQLRWQREVSLVNREERKWIPQKPKCEGGVG-----------GFVSIGITECRYA 636
            ..|   :|...||:....:.::   :|||      .|||..           |..:||       
Mouse   761 DEF---DLAILQLQENNRLEIL---KRKW------WEGGKCPKEEDHRAKGLGMENIG------- 806

  Fly   637 LGIFG---CGAAVSFVLFLFEFIF--RH 659
             |||.   ||..|:..:.:.||::  ||
Mouse   807 -GIFVVLICGLIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 22/82 (27%)
Lig_chan 386..643 CDD:459656 61/302 (20%)
Grik4NP_780690.2 Periplasmic_Binding_Protein_type1 24..402 CDD:471960 51/261 (20%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 86/410 (21%)
QRL_CxxC_CxxC 863..927 CDD:469521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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