DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and LOC110438919

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:656 Identity:129/656 - (19%)
Similarity:225/656 - (34%) Gaps:196/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VQVSTESSLRDL-QHVDALDEHKDAPPPKSFHANNSTHWETSFLLPALPYKMGILL----LEFSS 149
            :..:|.:.:.|. .|.....|...||..||....|:..        .|.|.|.:..    |.||.
Zfish   159 IATATSTMMMDRGPHTLLKSECHGAPDKKSPMTGNNNE--------VLRYLMNVTFEGRNLSFSE 215

  Fly   150 E-------CALNLL----------RWSAAS-EHNYFTTNRFWLLLTEDPGDIDLLEDPEIFIPPD 196
            :       ..:.||          :|...| ...|....||           :|...||  ...|
Zfish   216 DGYQMHPKLVIILLDKERQWDRVGKWENGSLSMKYHVWPRF-----------ELYSGPE--ARED 267

  Fly   197 SELRVLHYENVGNFSCSLIDLYKVAAWKPLKRTLVGHNIRNS---RHVIHAL-QHFGSAITYRQD 257
            ..|.::..|.........:|        ||..|.    :||:   |..:.|| |...||:..::.
Zfish   268 DHLSIVTLEEAPFVIVEDVD--------PLSGTC----MRNTVPCRKQLKALNQTQDSAVYIKRC 320

  Fly   258 LEGIVFNSAIVIAFPDLFTNIEDLSLRHIDTISKVNHRLMLELANRLNMSYNTYQTVN--YGWRQ 320
            .:|..                       ||.:.|:        |..:..:|:.|...|  :| ::
Zfish   321 CKGFC-----------------------IDILKKI--------AKNVKFTYDLYLVTNGKHG-KK 353

  Fly   321 PNGSFDGLMGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVANIFAMPF 385
            .||:::|::|........:|..::.:..:|..::||..........:|..:...:...:.|..||
Zfish   354 INGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPF 418

  Fly   386 ENDVWVSI-LMLLIITTVVLVLELFFSPHNHDMSYMD-------------TLNFVWGAMCQQGFY 436
            ..|||:.: :|||:::.:.:.:..:|||..::....|             .:..:||.:......
Zfish   419 SADVWIMMFVMLLLVSAIAVFIFEYFSPVGYNRCLADGREAGGPSFTIGKAIWLLWGLVFNNSVP 483

  Fly   437 VE-VRNRSARIIVFT-TFVAALFLFTSFSANIVALL--QSPSDAIQSLSDLG-------QSPLEI 490
            |: .|..:::|:|.. .|.|.:|| .|::||:.|.:  :...|.:..|||..       ..|...
Zfish   484 VQNPRGTTSKIMVSVWAFFAVIFL-ASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNDFSPPFRF 547

  Fly   491 GVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYMRPLL-GMEKMRTG---LFAYQVELQAGY 551
            |...        ..||:...:|.| :.:.|.....:.|.:: .:|.::||   .|.|...: ..|
Zfish   548 GTVP--------NGSTERNIRNNY-RDMHSYMVKFHQRNVVEALESLKTGKLDAFIYDAAV-LNY 602

  Fly   552 QIVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFP---YKELIRRQLRWQREVSL---------- 603
            ....|     |.|.|          :.|.:.|.|.   |...|::...|:|:|.|          
Zfish   603 MAGRD-----EGCKL----------VTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGE 652

  Fly   604 VNREERKWIPQKPKCEGGVGGFVSIGITECRY--------------ALGIF---GCGAAVSFVLF 651
            :...|..|:               .||  |.:              ..|:|   |...|:|.:.|
Zfish   653 MEELEALWL---------------TGI--CHHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITF 700

  Fly   652 LFEFIF 657
            :.|.:|
Zfish   701 IAEHVF 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 44/203 (22%)
Lig_chan 388..644 CDD:278489 63/314 (20%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 20/103 (19%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 96/486 (20%)
DUF4013 <389..478 CDD:315788 17/88 (19%)
NMDAR2_C 704..1417 CDD:313729 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591405
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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