DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and grid2

DIOPT Version :10

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:652 Identity:127/652 - (19%)
Similarity:239/652 - (36%) Gaps:182/652 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLMLVVCHTDIADFRLWKLWQHFN--LNNFYVQVSTESSLRDLQHVDALDEHKDAPPP-----KS 118
            :|:...||           |...|  :|:..||.....|:..|..:     .:..|.|     :.
 Frog   250 NLVAFDCH-----------WIIINEEINDLDVQELVRRSIGRLTII-----RQTFPVPHNSSQRC 298

  Fly   119 FHANNSTHWETSFLLPALPYKMG-----------ILLLEFSSECALNLLRW-SAASEHNYFTTNR 171
            |..|:..  .||...|..|:...           :|||..:....|...:| |.||.......::
 Frog   299 FRGNHRI--STSLCDPKDPFSQNMEITNMYIYDTVLLLANAFHKKLEDRKWHSMASLTCIRKNSK 361

  Fly   172 FW-----LLLTEDPGDI-------DLLED---PEIFIPPDSELRVLHY-ENVGNFSCSLIDLYKV 220
            .|     :|.|...|.:       |..||   |.|:.    |:...:| |.:|.      .:.|:
 Frog   362 PWQGGRSMLETVKKGGVSGLTGALDFSEDGGNPNIYF----EILGTNYGEELGR------GIRKL 416

  Fly   221 AAWKP---LKRTLVGHNIRNSRHVIHALQHFGSAITYRQDLEGIVFNSAIVIAFPDLFTN----- 277
            ..|.|   |..:|....:.|                   ::.|:|...|.|:..|.:..:     
 Frog   417 GFWNPVTGLNGSLTDRKLEN-------------------NMRGVVLRVATVLEEPFVMVSENVLG 462

  Fly   278 ----IEDLSLRHIDTISKVNHRLMLELANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGRFQRYE 336
                .:..|:..:|.:|           :.|...|..|...:  ||..|.:||::||:|......
 Frog   463 KPKKYQGFSIDVLDALS-----------SYLGFKYEIYVASDHKYGSPQADGSWNGLIGELLLKR 516

  Fly   337 LDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVANIFA--MPFENDVWVSILMLLII 399
            .|:...|:.:..||..:|||.........|::.|:  .....::||  .||:..:|..|...:::
 Frog   517 ADMGISALTITPDRENVVDFTTRYMDYSVGVLLRK--AEKTVDMFACLAPFDLSLWACIAGTVLL 579

  Fly   400 TTVVLVLELFFSPHNHDMSYM------DTLNFVWGAMCQQGFYVEVRNRSARIIVFTTFVAALFL 458
            ..:::.|..:.:|....|..|      :::.||:|:..|||..|.....:.|:::...::.||.:
 Frog   580 VGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIV 644

  Fly   459 FTSFSANIVALL--QSPSDAIQSLSDL-----------------------GQSPLEIGVQDTQYN 498
            .:|::||:.|.|  .....:||||.||                       |.:|.|   :|:.|:
 Frog   645 ISSYTANLAAFLTISRIESSIQSLQDLSRQTDIPYGTVFDSAVYEHVRVKGMNPFE---RDSMYS 706

  Fly   499 KIYFTESTDPVTKNLYHKKIASKGENIYMRPLLGMEKMRTGLFAYQVEL-----------QAGYQ 552
            :::          .:.::...|  ||.....|.|::|::.|.:|:..:.           ...:.
 Frog   707 QMW----------RMINRSNGS--ENNVQESLEGIQKVKHGNYAFVWDAAVLEYIAINDQDCSFY 759

  Fly   553 IVSDTFSEPEKCGLMELEPFQLPMLAIPTRKNFPYKELIRRQLRWQREVSLVNREERKWIPQKPK 617
            .|.:|.::..              ..|..:...||:::..:::...::...::..:.||.|:..:
 Frog   760 TVGNTIADRG--------------YGIALQHGSPYRDIFSQRILELQQNGDMDILKHKWWPRNGQ 810

  Fly   618 CE 619
            ||
 Frog   811 CE 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>372 CDD:473866 20/74 (27%)
Lig_chan 386..643 CDD:459656 50/276 (18%)
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:471960 43/206 (21%)
PBP2_iGluR_delta_2 440..806 CDD:270449 79/407 (19%)

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