DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75d and LOC100149482

DIOPT Version :9

Sequence 1:NP_649074.2 Gene:Ir75d / 40065 FlyBaseID:FBgn0036829 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:714 Identity:133/714 - (18%)
Similarity:224/714 - (31%) Gaps:283/714 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 LPALPYKMGILLLEFSSECALNL---------LRWSAAS-----EHNY---------FTTNRF-- 172
            |..:|.:.|.:.|:|||..||.|         ..|:|.|     .|.|         .|...|  
Zfish   161 LGRVPQESGSIFLQFSSSTALQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIG 225

  Fly   173 W-------LLLTEDPGDI---DLLEDPEIFIPPDSELRVLHYENVGNFSCSLIDLYKV--AAW-- 223
            |       |.||:|||.:   .||::.|      :::|:|:        ||..:..:|  |||  
Zfish   226 WEKKSIVMLNLTDDPGGVRTQRLLKENE------AQVRLLY--------CSQEEAEQVFLAAWAA 276

  Fly   224 --------------------------------------KPLKRTLVGHNI--------------- 235
                                                  :|.:|...|.:|               
Zfish   277 GQAGASHIWFAVGPALSELGLTGLPKRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGAT 341

  Fly   236 ------------RNSRHVIHALQHFGSAIT-----YRQDLEGIVFNSAI-VIAF----------- 271
                        .|....|.....:.|.||     |....||.:.|..: ||::           
Zfish   342 GGPHFVTNCQTDGNRTQRIRGRMRYFSNITLGGRDYSFSNEGYLANPFLDVISYTPGSGWEDVGW 406

  Fly   272 ----------------------PDLFTNIEDLSLRH--------IDTISKVNHR----------- 295
                                  ||...::..::|..        .|..|....|           
Zfish   407 WENGVLRLRYPAWSRYGPFLQPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNA 471

  Fly   296 --------------------LMLELANRLNMSYNTYQTVN--YGWRQPNGSFDGLMGRFQRYELD 338
                                ::..||..:..:|:.|...|  :| ::.:|.::|::|.......|
Zfish   472 SALQEGVAPVKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHG-KKIDGVWNGMVGEVVYKRAD 535

  Fly   339 LAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVANIFAMPFENDVWVS--ILMLLIITT 401
            :|..::.:..:|..:|||..........:|..:...:...:.|..|:...|||.  ::.|.::..
Zfish   536 MAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAV 600

  Fly   402 VVLVLELFFSPHNHDMSYMD-------------TLNFVWGAMCQQGFYVE-VRNRSARIIVFT-T 451
            .|.:.| ||||..::.|...             ::..:|..:......|| .:..:::|:|.. .
Zfish   601 TVFIFE-FFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMVLVWA 664

  Fly   452 FVAALFLFTSFSANIVALL--QSPSDAIQSLSDLG-QSPLEIGVQDTQYNKIYF-TESTDPVTKN 512
            |.|.:|| .|::||:.|.:  :...|.:..|||.. |.|.|      ||..:.| |.......||
Zfish   665 FFAVIFL-ASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTE------QYPPLKFGTVPNGSTEKN 722

  Fly   513 L-------------YHKKIASKGENIYMRPLLGMEKMRTG---LFAYQVELQAGYQIVSDTFSEP 561
            :             |::|....          .:..::||   .|.|...: ..|....|     
Zfish   723 IRSNYPDMHQYMVKYNQKSVED----------AISHLKTGKLDAFIYDAAV-LNYMARKD----- 771

  Fly   562 EKCGLMELEPFQLPMLAIPTRKNFP---YKELIRRQLRWQREVSL----------VNREERKWI 612
            |.|.:|          .|.:.|.|.   |...:.:..||:|.:.|          :...||.|:
Zfish   772 EGCKVM----------TIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWL 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75dNP_649074.2 Periplasmic_Binding_Protein_Type_2 299..>483 CDD:304360 45/204 (22%)
Lig_chan 388..644 CDD:278489 59/275 (21%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 50/273 (18%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 81/428 (19%)
HisJ <487..>570 CDD:223904 16/83 (19%)
Lig_chan 585..857 CDD:278489 59/275 (21%)
NMDAR2_C 868..>900 CDD:287527
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591534
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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