DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6841 and SPBC244.02c

DIOPT Version :9

Sequence 1:NP_001303371.1 Gene:CG6841 / 40064 FlyBaseID:FBgn0036828 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_596813.1 Gene:SPBC244.02c / 2540651 PomBaseID:SPBC244.02c Length:488 Species:Schizosaccharomyces pombe


Alignment Length:144 Identity:32/144 - (22%)
Similarity:55/144 - (38%) Gaps:40/144 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   769 LWLEAIRVELRAGLKEIASTMMARALQECPNAGELWAEAIFMETKPQRKTKSVDALKKCEHDPHV 833
            |||:.|....:.....|...:...|||:.||..|||..|                   |:|:   
pombe   109 LWLDYIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVA-------------------CDHE--- 151

  Fly   834 LLAVSKLFWSEHKFSKCRDWFNRTVKIDPDLGDAWAYFYKFELLHGTEA-QQQEVLDRCISAEPT 897
                   |......|..|...||.::::.:....||.:::.||.:.|:. .:.::|...||::  
pombe   152 -------FSINANVSAARALMNRALRLNQENPVIWAAYFRLELSYMTKLFARSQILTGNISSK-- 207

  Fly   898 HGESWCRVSKNIQN 911
                    ::||.|
pombe   208 --------TENITN 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6841NP_001303371.1 PRP1_N 22..173 CDD:283962
TPR repeat 393..419 CDD:276809
TPR repeat 424..448 CDD:276809
HAT 434..466 CDD:214642
TPR repeat 454..481 CDD:276809
TPR 543..803 CDD:223533 10/33 (30%)
HAT 546..576 CDD:214642
TPR repeat 633..660 CDD:276809
TPR_14 665..708 CDD:290164
TPR repeat 698..728 CDD:276809
TPR repeat 733..758 CDD:276809
TPR repeat 767..795 CDD:276809 6/25 (24%)
SPBC244.02cNP_596813.1 COG5191 1..452 CDD:227518 32/144 (22%)
U3_assoc_6 9..84 CDD:285803
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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