DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN1b and RPN7

DIOPT Version :9

Sequence 1:NP_524152.2 Gene:CSN1b / 40063 FlyBaseID:FBgn0027057 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_015433.1 Gene:RPN7 / 856223 SGDID:S000006312 Length:429 Species:Saccharomyces cerevisiae


Alignment Length:429 Identity:97/429 - (22%)
Similarity:169/429 - (39%) Gaps:54/429 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VEALKMAITYVQTTYN-VNLYQVLHKRLSDLNAGNAPAPPANAGGDQAGAAAPGPLA------AA 130
            ||.....:.||..|.| |..|:|..|...        ...:....:|...||...||      .|
Yeast     4 VEEKSQEVEYVDPTVNRVPNYEVSEKAFL--------LTQSKVSIEQRKEAAEFVLAKIKEEEMA 60

  Fly   131 PLPDIAAQPVAQAQGQAQPAVEKDAFAYDA--AWV--------------DTKMKKAALKLEKLDS 179
            |......:......||:.  :|.|..: |:  .|:              ::|:|:...|::||:.
Yeast    61 PYYKYLCEEYLVNNGQSD--LEHDEKS-DSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEE 122

  Fly   180 DLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYL 244
            |    ....::::  :...:|.::|...||..||.|...::.....|....:::.|.:.::..:.
Yeast   123 D----DEGELEQA--QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFY 181

  Fly   245 QNWAHVMSYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQKKYKVAAKHFLN--ANFDHC 307
            .:..:|.   .|.|:.....|  |..:.:...|.:...|:..|..:.:|.|||..::  |.|...
Yeast   182 NDQLYVK---EKLEAVNSMIE--KGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSI 241

  Fly   308 DFPEMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDI---IFKFYESKYAS 369
               |:.|..::|.|..:..|.|.:|.:||..||.|......:.....|:.|   ....|.|.|||
Yeast   242 ---ELTSYESIATYASVTGLFTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYAS 303

  Fly   370 CLTLLDEIRDNLLVD-MYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEV 433
            ....|.|...|:|:. .|:..|......::|.:...|....|.:..:..||.||..||..|:|::
Yeast   304 YFPYLLETYANVLIPCKYLNRHADFFVREMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDL 368

  Fly   434 MQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMG 472
            .:.|.:.|:...||..|.|:.....|.:|:.:...:..|
Yeast   369 GKFIPNKQLNCVIDRVNGIVETNRPDNKNAQYHLLVKQG 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN1bNP_524152.2 RPN7 159..338 CDD:287560 40/196 (20%)
PCI 353..457 CDD:279707 30/107 (28%)
RPN7NP_015433.1 RPN7 2..429 CDD:227514 97/429 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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