DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN1b and gps1

DIOPT Version :10

Sequence 1:NP_524152.2 Gene:CSN1b / 40063 FlyBaseID:FBgn0027057 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_073799702.1 Gene:gps1 / 777711 ZFINID:ZDB-GENE-041111-240 Length:547 Species:Danio rerio


Alignment Length:508 Identity:308/508 - (60%)
Similarity:388/508 - (76%) Gaps:47/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MQNAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLEVYANQYAGIVRLHRLIYVADVCPVLAVE 74
            ::.:|||||:| |.|.||.:|..:...|||||::|||.||:.|:|::|:.||.::||.||.|.||
Zfish    69 LEGSVEPMQID-ADPQEDQQNAPDTNYVVENPTLDLEQYASSYSGLMRIERLQFIADHCPQLRVE 132

  Fly    75 ALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAPAPPANAGGDQAGAAAPGPLAAAPLPDIAAQP 139
            |||||:::||.|:||::|:.:|::|::........|.|    ...||..|.||            
Zfish   133 ALKMALSFVQRTFNVDVYEEIHRKLTEATREVQGVPDA----VPEGAVEPPPL------------ 181

  Fly   140 VAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHY 204
                               |.||.::..|||.|||||||:||||||.||||||||||||||.|||
Zfish   182 -------------------DTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHY 227

  Fly   205 LSCGDLTNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKE 269
            |.||||:|||||||||||||||.|||:||||||||||:|||||:||:||:|||||||:.||...|
Zfish   228 LDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 292

  Fly   270 ANAQ---VHTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGLCALATFD 331
            .::|   |.|:|:||||||||..:|||.|||.||.|:||||||||::|.||||||||||||||||
Zfish   293 RDSQNQAVLTKLKCAAGLAELASRKYKPAAKCFLQASFDHCDFPELLSPSNVAVYGGLCALATFD 357

  Fly   332 RQELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYT 396
            ||||:|.||:|:|||||||||||:||||||||||||||||.:|||::||||:|||:||||.||||
Zfish   358 RQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYT 422

  Fly   397 KIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQR 461
            :|||||||||||||:||||:|||:|||::|..||:|:.||||:|.|.||||||:|||:|::.|||
Zfish   423 QIRNRALIQYFSPYVSADMNKMAVAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQR 487

  Fly   462 NSTFERALIMGKQYQRHTRMLVLRAAMLKSHIHVKSISREG--------GSNH 506
            ::|||::|.|||::||..:.::||||:|::.||||.....|        ||:|
Zfish   488 STTFEKSLQMGKEFQRRAKAMILRAAVLRNQIHVKVTGSPGPLQEKAVKGSSH 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN1bNP_524152.2 RPN7 159..338 CDD:431387 138/181 (76%)
PCI 353..457 CDD:460195 79/103 (77%)
gps1XP_073799702.1 None

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