Protein Alignment CG6843 and Rp9

DIOPT Version :10

• Sequence 1: NP_649072.1
• Gene: CG6843 / 40062
• FlyBaseID: FBgn0036827
• Length: 366
• Species: Drosophila melanogaster
• Sequence 2: NP_001388106.1
• Gene: Rp9 / 363032
• RGDID: 1559759
• Length: 211
• Species: Rattus norvegicus
• Alignment Length: 267
• Identity: 66/267 - (24%)
• Similarity: 112/267 - (41%)
• Gaps: 73/267 - (27%)

  Fly    39 QEELRNQYEKEQNLHENKAMLSKDSKDKLSVNFMYEPPPGVRKEREKDDNEPEYKFEWQRKYNAP 103
            :.||:.:.|:::..|:.:.:    .:.|...:|..:||||..||   |:.:||............
  Rat    15 EHELQRRREQKRRRHDAQQL----QQLKHLESFYEKPPPGFIKE---DETKPEDCIPDVPGNEHA 72

  Fly   104 RESYCKGDTEIRDQPFGIQVRNVRCLKCHKWGHINTDKECTMY---SISMSEARKLHAETEASDI 165
            ||......|:....|.|.:|:.::|.:|.::||...||||..:   :..:.:.|..| |....||
  Rat    73 REFLAHAPTKGLWMPLGREVKVMQCWRCKRYGHRTGDKECPFFIKGNQKLEQFRVAH-EDPMYDI 136

  Fly   166 MAKNVLEEQMKEDGLMMKRSAQELQSIRAIQQQHQLVPSDGEKDAHADDQNPELVFLKSLSKKQK 230
            :.:|             ||..::::    |||..||:     :|:.:||..
  Rat   137 IREN-------------KRHEKDVR----IQQLKQLL-----EDSTSDDDG-------------- 165

  Fly   231 LKLLKKLEKIERMKRKGEGIKKPTKRKSKKERHEKDSKKKKSKKDKSSRKDKKGSVSNSSDSSSS 295
                          ....|.::..|::.|||:|:   |:||.||.|..||.|         :|.|
  Rat   166 --------------SSSSGDREKHKKRKKKEKHK---KRKKEKKKKKKRKHK---------ASKS 204

  Fly   296 SDSSDSE 302
            .:||||:
  Rat   205 HESSDSK 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6843	NP_649072.1	Cir_N	14..49	CDD:462992	3/9 (33%)
Rp9	NP_001388106.1	None